Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0500 ATGGAGGAGAAGAGCAAAATCTTGATAATTGGGGCAACTGGATTCCTAGGTTACAATCTAGCAGAGACAAGCCTCAAATTTGGTCACCCCACATTTGCTCTTGTTAGAGACTCTGCATTTTCTGACCCCATCAAATCCCAAAAGCTTCAATTCCTTTCCCATGCCGGAGCCACCCTTCTCAAAGGTTCGCTTCAAGACGAAGCTAGCATTGTTGATGCTGTCAAGTTAGTAGATGTCGTCATTTGTGCTGTTTCGTCTAAACAGACTCTTGATCAAAAACTTCTCATCAGGGTTATCAAACAACTGGGCACTATCAAGAGGTTCGTCCCATCTGAATTTGGATCAGATCCTATCAAGGCTCGAGTAACTGAGCTTGATGATGGCTATAATTTCTATGCACCCAAAATTGAAATTCGGCGGCTCGTGGAGGCTGAAGGCATTCCATATACTTATATCTCGTGCAATTTCTTCATGAAGGTTTTGCTTCCTTCTCTTGCTCAACCAGGCTTAGAAGCTCCTCCACGTGATAAGGTCACCATATTTGGTGATGGGAATACCAAAGCTGTTTTTATGAAGGAAAGTGATGTTGCTGCCTTCACTATCAGTGCAGTTGACGACCCCCGTACGTTAAATAAAGTGGTGTACTTGAGACCCCCAGGAAATGTTTATTCTTTGAATGAGCTGGTTGAGATGTGGGAGACTAAGATTGGGAAGAAGCTTGAGAAATTGCATGTCTTAGAAGAAGAGCTGCTCACGAAAATCAACGGAACTTCTTTCCCTTCCAACTCCAAAATGCTTTTTATATATTCTGCTTTCATCAAGGGAGATCACACATACTTTGATATTGAGTCATCCTCTGGTGTGAATGGTACAGAACTGTATCCGCAACTGAAATATACCACTGTCAGTGAATTCTTAGACACACTAATTTAG 933 0.4223 MEEKSKILIIGATGFLGYNLAETSLKFGHPTFALVRDSAFSDPIKSQKLQFLSHAGATLLKGSLQDEASIVDAVKLVDVVICAVSSKQTLDQKLLIRVIKQLGTIKRFVPSEFGSDPIKARVTELDDGYNFYAPKIEIRRLVEAEGIPYTYISCNFFMKVLLPSLAQPGLEAPPRDKVTIFGDGNTKAVFMKESDVAAFTISAVDDPRTLNKVVYLRPPGNVYSLNELVEMWETKIGKKLEKLHVLEEELLTKINGTSFPSNSKMLFIYSAFIKGDHTYFDIESSSGVNGTELYPQLKYTTVSEFLDTLI* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0500 310 Gene3D - 5 295 - -
Lja3g0500 310 PANTHER PINORESINOL REDUCTASE-RELATED 3 308 - -
Lja3g0500 310 Gene3D - 155 306 - -
Lja3g0500 310 CDD PCBER_SDR_a 6 305 IPR045312 GO:0016491
Lja3g0500 310 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 281 IPR036291 -
Lja3g0500 310 PANTHER PINORESINOL-LARICIRESINOL REDUCTASE 3-RELATED 3 308 - -
Lja3g0500 310 Pfam NmrA-like family 7 239 IPR008030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0500 Lja-Chr3 5034155 5036445 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0500 - - var:108339735 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0500 3 5034155 5036445 Lja3g0500 3 5034155 5036445 ECH