Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0497 ATGGGGAAAGCGAAAGCGAAGGGGAAGCACCGTTTGGACAAGTACTATCACCTAGCCAAAGAACACGGTTACAGGTCCAGAGCTTCATGGAAGCTAATCCAGCTCAACTCCAAGTTCCGCTTCCTCGAATCCGCACACTCCGTACTCGATCTCTGCGCCGCCCCCGGTGGTTGGATGCAGGTCGCCGTCCAGCGCGTCCCCGTCGACCACCTCGTCATCGGCGTTGATCTCGCCCCTATCGCCCCTGTCCGCGGTGCCATCGCTATACAAGAGGATATCACCAAGACCGAGTGCAGGTCCCGCATCAAGAAGCTCATGAATGACAACCGCTGCGCCGCCTTCGACGTTATTCTCCACGACGGTTCGCCCAACGTCGGTGGTGCATGGGCTCAGGAAGCTACGTCGCAGAACGCTCTTGTTATTGATGCTGTCAAGTTGGCTACACAGTTCTTAGCCCCCAAGGGCACGTTCGTCACTAAGATTTTCAGGTCGCAGGATTACAGTTCTGTTGTGTATTGTTTGAAGCAGTTGTTTGAAAAGGTTGAGGTGGATAAACCAGCTGCTAGTCGTTCTGAGTCTGCTGAGATATATGTTTTGGGCCTTAAGTATAAGGCCCCGGCTAAGATTGATCCGCGCCTTCTCGATGTCAAGCATCTCTTTCAGGGTTCTGCGCAACCACAGGCTAAGGTGGTGGATGTACTTAGAGAAAATAAGCAAAAGAGGCATCGGGATGGCTATGAAGATGGAGTCTCGACTTTACGGAAGGTGTCTTCAGCTGCAGATTTCATTTGGTCAGCTTCTCCTTTGGAGGTCCTTGGTTCTGTTACGTCCATAACCTTCAATGACCCAGCTGATTTACCAATTAAGAATCATGACTTAACAACTGAAGAGGTAAAATCTCTCTGCGATGACTTGAGAGTTTTGGGGAAGCAGGACTTCAAGCATCTTCTGAAGTGGCGAATTCACATTAGGAAAGCTCTTTCACCTGATAAAAAGCCGGAACCTACTACTAAAGCAGAGATGGAAAATGAGCATATAGTGGATGAAGATGATAGAATACTTAATGAAATGGAGGAGTTGACACATGCAGTGGACCGCAAGAAAAAACGTGAAAAAAAGCTTCTTGCAAAAAGAAGAGCTAAGGATAAGGCCCGCAAAGCAACAGGGATGCAAACGGATGCAATAGAAGATGGTTATGTTGATCATGAGTTGTTTTCTCTTTCATCTATCAAGGGTAAGAAGGATCTGGTCACTGTTGATACCACTGAATATGAAGGGGATGAGGGTGAAGTGGAAGACAGTGAAAATGAAGATATCAATGAAGGCTCAGAGCATTCATCCAGTGACTTAGATTCTGATGAAGAACGCAAAAGATATGATGAGCAAATGGAAAATTTACTTGAGCAAGCATATGAGCGGTTTGTGGTCAGAAAGGATGGAAGTACAAAGCAGCGGAAGCGGATTAAGAAATCATATGATGCAGAGACCCAACTTTTGGAGGCTGGTGAGGATGATGGCATTATTCAGTCTAAATACGATTCTGATGAAGATCAGGATGATCAAGAAGCAAATCCCTTGGTGGTACCCCTTAATGATGGGGCAGAGCCCACCCAAGAGGAGATTACTGATAAATGGTTTAGTCAGGATGTCTTTGCTGAAGCTGTAGAGGAAGGAGACTTTGACAAGGACGAGAGTGAAGATGAAATGGATATTGATGAGCGTAAGGAGAAGACGGAGAAGACTGCTGTTGCAAAAAAGGTCAAAGAAAATAAAACAACAGCGTTTGCCGAGATAGATCACCCTAAATCTCAAGCATCTAAGGCAGAGGATTTTGAGGTTGTTAAGGAGCCTGCTACTGATTCCGGCAGTGATGATTCAAGCGATGATTCATCAGATGTACCCAAAGCTGAGACATTGGCTTGTGCTAAGAAAATGCTGAGAAAAAAGCAACGAGAGCAGATACTAGATGACGCATATAATAAGTACATGTTTGATGATGATGGATTGCCCAAGTGGTTTCTAGATGACGAAAAGAAGCACCGCCAACCAATGAAGCCGGTCACTAAAGAGGAAGTTAATGCAATGAAAGCACAATTTAAAGAAATCAATGCTCGGTCATCAAAGAAGGTGGCCGAGGCCAAAGCACGGAAGAAGCGTGTGCAGATGAGGAAGCTTGAGAAAGTACGTAAGAAGGCCAATGCTATATCAGATCAGACAGAAATATCTGATTTTTCGAAGACGAAGCAAATTGAAAAACTATATAGAAAGGCTGATCCGAAGAGGCCTAAAAAAGAATATGTCGTTGCAAAGAAAGGTGTCCAAGTTAGGACTGGCAAGGGGAAAGTCCTTGTTGATCGCAGAATGAAGAAGGATGCTAGGAAACATGGAATGAACAAGACAGGAAAAGGAGGTTCCAAAAACGGTAAAGGTAAGGCTCCGAAGGGCAAAGGATCTTCAAAGGGATCTTCAAAGGCTTCTGCACAGAAGGGAAGGAAGGGGAATAAGTGA 2508 0.4545 MGKAKAKGKHRLDKYYHLAKEHGYRSRASWKLIQLNSKFRFLESAHSVLDLCAAPGGWMQVAVQRVPVDHLVIGVDLAPIAPVRGAIAIQEDITKTECRSRIKKLMNDNRCAAFDVILHDGSPNVGGAWAQEATSQNALVIDAVKLATQFLAPKGTFVTKIFRSQDYSSVVYCLKQLFEKVEVDKPAASRSESAEIYVLGLKYKAPAKIDPRLLDVKHLFQGSAQPQAKVVDVLRENKQKRHRDGYEDGVSTLRKVSSAADFIWSASPLEVLGSVTSITFNDPADLPIKNHDLTTEEVKSLCDDLRVLGKQDFKHLLKWRIHIRKALSPDKKPEPTTKAEMENEHIVDEDDRILNEMEELTHAVDRKKKREKKLLAKRRAKDKARKATGMQTDAIEDGYVDHELFSLSSIKGKKDLVTVDTTEYEGDEGEVEDSENEDINEGSEHSSSDLDSDEERKRYDEQMENLLEQAYERFVVRKDGSTKQRKRIKKSYDAETQLLEAGEDDGIIQSKYDSDEDQDDQEANPLVVPLNDGAEPTQEEITDKWFSQDVFAEAVEEGDFDKDESEDEMDIDERKEKTEKTAVAKKVKENKTTAFAEIDHPKSQASKAEDFEVVKEPATDSGSDDSSDDSSDVPKAETLACAKKMLRKKQREQILDDAYNKYMFDDDGLPKWFLDDEKKHRQPMKPVTKEEVNAMKAQFKEINARSSKKVAEAKARKKRVQMRKLEKVRKKANAISDQTEISDFSKTKQIEKLYRKADPKRPKKEYVVAKKGVQVRTGKGKVLVDRRMKKDARKHGMNKTGKGGSKNGKGKAPKGKGSSKGSSKASAQKGRKGNK* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0497 835 PANTHER RRNA METHYLTRANSFERASE-RELATED 5 803 - -
Lja3g0497 835 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 23 204 IPR029063 -
Lja3g0497 835 Pfam Domain of unknown function (DUF3381) 237 385 IPR024576 -
Lja3g0497 835 MobiDBLite consensus disorder prediction 479 636 - -
Lja3g0497 835 MobiDBLite consensus disorder prediction 819 835 - -
Lja3g0497 835 Coils Coil 708 728 - -
Lja3g0497 835 MobiDBLite consensus disorder prediction 756 770 - -
Lja3g0497 835 PANTHER RIBOSOMAL RNA METHYLTRANSFERASE 5 803 - -
Lja3g0497 835 MobiDBLite consensus disorder prediction 422 464 - -
Lja3g0497 835 MobiDBLite consensus disorder prediction 422 439 - -
Lja3g0497 835 Pfam FtsJ-like methyltransferase 24 202 IPR002877 GO:0008168|GO:0032259
Lja3g0497 835 MobiDBLite consensus disorder prediction 440 464 - -
Lja3g0497 835 MobiDBLite consensus disorder prediction 554 570 - -
Lja3g0497 835 MobiDBLite consensus disorder prediction 361 389 - -
Lja3g0497 835 Hamap AdoMet-dependent rRNA methyltransferase <gene_name> [SPB1]. 1 802 IPR028589 GO:0008649|GO:0031167
Lja3g0497 835 MobiDBLite consensus disorder prediction 367 384 - -
Lja3g0497 835 MobiDBLite consensus disorder prediction 756 835 - -
Lja3g0497 835 Hamap Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 204 IPR015507 GO:0001510|GO:0008168
Lja3g0497 835 MobiDBLite consensus disorder prediction 479 497 - -
Lja3g0497 835 Coils Coil 357 377 - -
Lja3g0497 835 MobiDBLite consensus disorder prediction 705 736 - -
Lja3g0497 835 MobiDBLite consensus disorder prediction 711 726 - -
Lja3g0497 835 Gene3D Vaccinia Virus protein VP39 21 210 IPR029063 -
Lja3g0497 835 MobiDBLite consensus disorder prediction 571 632 - -
Lja3g0497 835 Pfam Spb1 C-terminal domain 594 797 IPR012920 GO:0005634|GO:0006364|GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0497 K14857 - gmx:100790741 1249.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0497 3 5018592 5024223 Lja3g0497 3 5018592 5024223 ECH