Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0496 ATGGAAGGAACTGGAGGCAGCAGTGCCTCTGCTGCTGCACCCGTGAACCAATGGTGGCTGGAATTTTCAAAGATGTTCCAGTATTATCTCGATAAATCTACCCCGCACACTACGTATAGATGGATTGGGACCGTGGTTATCGCCTCGATCTATGTTTTGAGGGTTTTTTATGTCCAGGGATTTTACATTGTGTCTTATGGATTGGGAATCTACCTGCTCAACCTCTTGATTGGGTTTCTTTCACCTTTGGTTGATCCTGAGGTCGAGCATTCTGATGGCCCTTTGCTGCCTACTAAAGGCTCCGACGAGTTCAAACCCTTCATTCGCCGCCTTCCTGAGTTTAAGTTCTGGTATTCTTTCACAAAGGCTTTCTGCATAGCTTTTGTGATGACTTTCTTTTCTGTATTTGATGTTCCTGTCTTCTGGCCAATATTGCTCTGTTACTGGATCGTTCTGTTTGTCCTAACAATGAGGCGCCAAATTGCACACATGATCAAATACAAATATATTCCATTGAACCTTGGAAAGCAGAAGTACGGTGGCAAGAAATCTTCTGCAAGTAGCAGCGGCTCTCGTGCAGACTAA 585 0.4462 MEGTGGSSASAAAPVNQWWLEFSKMFQYYLDKSTPHTTYRWIGTVVIASIYVLRVFYVQGFYIVSYGLGIYLLNLLIGFLSPLVDPEVEHSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPLNLGKQKYGGKKSSASSSGSRAD* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0496 194 PIRSF AtER_Rer1p 1 190 IPR004932 GO:0016021
Lja3g0496 194 PANTHER PROTEIN RER1A 1 190 - -
Lja3g0496 194 Pfam Rer1 family 21 180 IPR004932 GO:0016021
Lja3g0496 194 PANTHER PROTEIN RER1 1 190 IPR004932 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0496 Lja-Chr3 5000895 5004355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0496 1 194 Miscellaneous Gene Families AT2G21600 76.923 8.27e-110 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0496 - - rcu:8285331 307.76