Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0488 ATGGAAGAAAGGCAGATCCACAGGCTCAATTCTACCTTCAATCTTCTCAACTCTTCTCTTCTCTTGAATAAAATGGCAGCCTCTTTCCATGCTCGCTCAAACAGCTTGCCCTCTAGACCACACCCTCTCATTCTGGAATGCAATGAACACTTGGAAAGGTTGAGATCTTCCAATGAAACCTCTTCTTCATCTTCATTGCTTAGCCATAAACTAGGAGCCTTGCAGGATCTTCATGAATGTGTTGAAAAATTGGTACAGCTTCCTCTCACCCAAGAAGCCCTTCTCCATGAACCTCAAGAATCATGTGTAAATGATGAGCTCTTGGATGGATCCTTGAGGCTCCTAGATGTGTGCACAGCAGCCAAAGACTCTCTACTGCATACGAAGGAGTGCATGAGGGAACTTCAATCAATTATGAGAAGGAAAAGAGGTGAAGATCTAGGCATCACAGCAGAGGCTAAAAAGTTCTTGACTTCAAGGAAAGATTTGAAGACTATTGCCAAAAAGGGCAACATGAAAGACCAACAAAGTGTGGCCTTGGTTAGCTTGTTAAAAGATGTTGAAGTAGCCACTCTTTCCATATTTGAATCAATGTTGAATTTTATCTCTGGATCATCAACACAAGCAAAACCAAGTACCTGGTCTTTGGTTTCCAAGTTAGTCCACACCAAAAAAATAAGCTGCCAACAAGTAGCAGATGAAAATGAATTTTCACAAGTAGATGCAACACTGCAGTCCTCTGTACTTCAAATGACAAACAACAAATCAGACAGCACCATTGATCTACAAAACCACTTGGAGAAATTGGAGATTTGCATTCAAGACCTTGAAGAAGGGCTTGAGTTTCTATTCAGACGTTTGATTAAAATCAGAGTTGCACTTCTTAACATCCTCACTCCCTAG 903 0.4109 MEERQIHRLNSTFNLLNSSLLLNKMAASFHARSNSLPSRPHPLILECNEHLERLRSSNETSSSSSLLSHKLGALQDLHECVEKLVQLPLTQEALLHEPQESCVNDELLDGSLRLLDVCTAAKDSLLHTKECMRELQSIMRRKRGEDLGITAEAKKFLTSRKDLKTIAKKGNMKDQQSVALVSLLKDVEVATLSIFESMLNFISGSSTQAKPSTWSLVSKLVHTKKISCQQVADENEFSQVDATLQSSVLQMTNNKSDSTIDLQNHLEKLEICIQDLEEGLEFLFRRLIKIRVALLNILTP* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0488 300 Coils Coil 266 286 - -
Lja3g0488 300 PANTHER BPS1-LIKE PROTEIN 26 299 - -
Lja3g0488 300 Pfam Protein BPS1 70 297 IPR004320 GO:0048364|GO:0048367
Lja3g0488 300 PANTHER DUF241 DOMAIN PROTEIN 26 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0488 Lja-Chr3 4915989 4916923 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0488 - - ahf:112771862 317.39