Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja3g0470 | ATGAATCGGGAAAAATTGATGAAGATGGCCGGTTCAGTTCGAACTGGTGGAAAGGGTACAGTGAGAAGAAAGAAGAAGGCTGTTCACAAGACAACAACCACCGATGATAAAAGGCTACAGAGCACCCTGAAGAGAATAGGGGTGAATGCCATCCCCGCAATTGAGGAGGTCAACATCTTCAAGGATGATGTAGTTATCCAGTTTCTAAACCCCAAAGTTCAAGCATCTATTGCTGCTAATACTTGGGTTGTTAGTGGTGCACCTCAAACAAAGAAGTTGCAGGATATACTCCCCAGTATCATCCACCAATTAGGACCAGATAATTTGGAAAACCTGAAAAAGCTAGCTGAACAGTTTCAGAAGCAGGCTCCTGAAGCAGGTGCTGCCGATTCAACCGCAGCACAAGAGGAGAATGATGATGACGTCCCAGAGCTTGTTCCAGGGGAGACTTTTGAGACAGTTGCTGAGGAGGAGACCAAGGCTACTTCTTAG | 492 | 0.4593 | MNREKLMKMAGSVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPSIIHQLGPDNLENLKKLAEQFQKQAPEAGAADSTAAQEENDDDVPELVPGETFETVAEEETKATS* | 164 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja3g0470 | 163 | MobiDBLite | consensus disorder prediction | 120 | 163 | - | - | |
| Lja3g0470 | 163 | PANTHER | TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER | 1 | 160 | IPR039370 | - | |
| Lja3g0470 | 163 | Gene3D | - | 48 | 104 | IPR038187 | - | |
| Lja3g0470 | 163 | ProSiteProfiles | NAC A/B domain profile. | 33 | 97 | IPR002715 | - | |
| Lja3g0470 | 163 | SMART | NAC_2 | 36 | 91 | IPR002715 | - | |
| Lja3g0470 | 163 | PANTHER | NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT BETA | 1 | 160 | - | - | |
| Lja3g0470 | 163 | Pfam | NAC domain | 36 | 91 | IPR002715 | - | |
| Lja3g0470 | 163 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja3g0470 | Lja-Chr3 | 4749766 | 4752519 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja3g0470 | K01527 | - | gmx:100500153 | 288.885 |