Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0465 ATGGTTGATCATCGGATTCTTTTCCTCTTGTTTGTGTTCTTCCTCTTCTTCTCCAACGTCTCCTCCTCCGACGGCGTCGACCCGATGATCTGTCAGGTGGTCGACGACGAGGGTTTGGGGGCAGAACACCACTTTCTGGAGTTTAAGCGTCGGTTCGGGAAGGTGTACGCTACCGAGGAGGAGCATGGTTACAGGTTCAATGTGTTCAAGTCTAACATGCACCGAGCACGCCGCCACCAGCTGTTGGACCCGTCTGCGGTTCACGGCGTGACGCGGTTCTCTGATCTGACGCCGATGGAGTTCCGCCACAGTGTTTTGGGCCTCAGAGGAGTGGGTTTGCCTTCTGATGCAGACAGCGCTCCCATTCTCCCGACTGATAATCTTCCGAAGGATTTTGATTGGAGAGATTTTAGTGCAACTGGGGCACTTGAAGGTGCTCACTTTCTCTCTACTGGTGAACTTGTCAGTCTTAGCGAGCAACAGCTTGTGGATTGTGATCACCAGTGTGATCCAGAAGAAGCAGGTTCTTGTGACTCTGGCTGCAATGGTGGATTGATGAACAGTGCTTTTGAGTACATCCTTAACAATGGTGGAGTCATGCGAGAGGAAGACTATCCTTACTCTGGTACTAATGGAGGGACTTGCAAATTTGACAAAGCAAAGATTGCAGCATCGGTGGCAAACTTCAGTGTTGTCTCACGTGATGAAGATCAGATTGCCGCAAATCTTGTCAAAAACGGTCCTCTTGCCGTGGCCATCAATGCAGTATATATGCAGACATATGTGGGTGGAGTGTCGTGCCCATACGTATGTTCAAAGAAGCTGAATCATGGGGTCTTGTTGGTGGGATACGGTTCTGAAAGCTATGCACCAATTCGGATGAAGCAGAAGCCATATTGGATAATCAAAAATTCCTGGGGAGAGAATTGGGGAGAAAATGGATACTACAAGATTTGCAGAGGAAGAAATATCTGTGGGGTGGACTCTATGGTTTCAACTGTGGCTGCTCTTCATACCACTGGGAACTAA 1029 0.4888 MVDHRILFLLFVFFLFFSNVSSSDGVDPMICQVVDDEGLGAEHHFLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDPSAVHGVTRFSDLTPMEFRHSVLGLRGVGLPSDADSAPILPTDNLPKDFDWRDFSATGALEGAHFLSTGELVSLSEQQLVDCDHQCDPEEAGSCDSGCNGGLMNSAFEYILNNGGVMREEDYPYSGTNGGTCKFDKAKIAASVANFSVVSRDEDQIAANLVKNGPLAVAINAVYMQTYVGGVSCPYVCSKKLNHGVLLVGYGSESYAPIRMKQKPYWIIKNSWGENWGENGYYKICRGRNICGVDSMVSTVAALHTTGN* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0465 342 SMART pept_c1 128 335 IPR000668 GO:0006508|GO:0008234
Lja3g0465 342 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 275 285 IPR025660 -
Lja3g0465 342 PANTHER CYSTEINE PROTEASE RD19C-RELATED 137 336 - -
Lja3g0465 342 CDD Peptidase_C1A 129 334 IPR039417 -
Lja3g0465 342 Pfam Cathepsin propeptide inhibitor domain (I29) 45 101 IPR013201 -
Lja3g0465 342 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 137 336 - -
Lja3g0465 342 Gene3D Cysteine proteinases 22 335 - -
Lja3g0465 342 Pfam Papain family cysteine protease 137 333 IPR000668 GO:0006508|GO:0008234
Lja3g0465 342 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 299 318 IPR025661 -
Lja3g0465 342 SUPERFAMILY Cysteine proteinases 43 334 IPR038765 -
Lja3g0465 342 SMART Inhibitor_I29_2 45 101 IPR013201 -
Lja3g0465 342 PANTHER CYSTEINE PROTEASE RD19C-RELATED 30 136 - -
Lja3g0465 342 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 30 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0465 Lja-Chr3 4718891 4720478 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0465 K01373 - gmx:100812198 561.607