Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0459 ATGGCATCATCGTCTTCCCGAGCAAGAAGCAGCTCGCCGTTTTCGCACCGGAAACCCTCCACTCCTTCTTACTCCCCTGCTTCTTCATCTTACTCTTCCTTCACCAACGGAAAGTTAATGCCACGCTCCTGCTCTTCTTCCGCCTCGTCGTTTTTCAACTCTGCTGATTGTGGTGGACGATCCATAGCTCCGAGTCGCAGCGAGTCATCAACCTTTTACGCTGCGTACGACTGTGGTGGTGGTGGTGGTGGTGGTTCATCTACGTTGGAGTTCGGGATGGAGGATGTGATCGCGGAGCCTGTAGATTCTTCTAGGTCTAGTGATAGCATTTCGGTCACGATTCGGTTCAGACCGTTGAGTGAAAGAGAGTATCAGAGAGGAGACGAGATCGCGTGGTATGCAGATGGTGATAAGTTTGTGAGAAATGAATATAATCCAGCTACTGCTTATGGATTTGATAGAGTGTTTGGTCCACATACAATTACTGATGAGGTGTATGAGGTAGCAGCTAAACCTGTCGTGAAGGCTGCCATGGAAGGGGTTAATGGAACTGTGTTTGCCTACGGTGTGACGAGTAGTGGAAAGACACATACGATGCACGGTGACCAAGATTCTCCTGGTATCATACCACTGGCTATTAAGGATGTTTTCAGCATTATCCAAGATACTCCAGGAAGAGAGTTCTTGCTTCGAGTGTCATATCTAGAAATATACAATGAGGTGATAAATGACTTGCTTGACCCAACTGGCCAAAATTTGCGAGTTAGAGAAGATGCACAGGGTACTTATGTGGAGGGTATAAAGGAAGAAGTAGTTTTGTCTCCTGGACACGCACTTTCATTTATTGCTGCTGGAGAAGAGCATCGCCATGTTGGATCAAACAATTTTAACCTCTTCAGCAGCCGAAGTCATACAATTTTTACACTTATGATTGAAAGCAGTGCCCATGGTGAAGATTATGATGGAGTGATCTTCTCTCAGCTTAACTTGATCGATCTGGCTGGATCTGAAAGTTCAAAAACTGATACAACTGGATTAAGAAGAAAAGAAGGTTCATACATTAACAAAAGTCTTCTGACACTTGGAACTGTTATTGGAAAATTGAGTGAGGGGAAAGCATCTCATGTTCCATATCGAGACTCAAAGCTTACTCGCCTCCTGCAGTCTTCACTTAGTGGGCATGGCCATGTTTCACTTATATGCACTGTGACTCCAGCATCCAGTAATATGGAAGAAACTCACAATACCTTGAAGTTTGCAAGCAGGGCAAAGCGAGTAGAAATATATGCCTCGCGTAATAAGATTATTGACGAAAAATCTCTAATTAAGAAGTACCAGAGAGAAATTTCAGTCCTCAAATATGAACTTGATGAGATGAAGAAGGGGATGCAACTTGGTGTCAGCCATGAGGAGATCATAAGCTTAAAGCAAAAGTTAGAAGAAGGTCAAGTGAAAATGCAGTCAAGGTTGGAAGAAGAGGAAGAAGCAAAGGTTGCCCTTATGAGTAGGATCCAGAGGTTAACCAAGCTCATTCTGGTTTCTTCGAAGAATGCTATTCCTGGATATTTAACCGATATACCTGGCCACAAGCGAACTTACTCTGCTGATGAGGAAGATAAACACGATGTCTTACGTGATGGATCACTTCTGATTGAAAATGAGAGGAAAGTAGATGATGCCACACTGTCATCTGATCTGTCTCATGATGTTCGACATAGAAGATCATCAAGTAGATGGAATGAAGAGCTCTCCCCATCTAGCAGTTTTATAACTGAATCAACGCAAGCTGGTGAACTGATCAGCGGAAGAAGGGCACCAGCGGGAGGGATAACAATGTCTGATCAGATGGATCTTCTCGTTGAGCAAGTCAAAATGCTTGCTGGAGATATTGCTTTCAGTACCAGCACTCTGAAGCGCTTGACGGAGCAGTCTGTAAATGATCCTGAAGGCTCCAAAACTCAGATTGAGAGCTTGGAACAAGAGATCCTAGAAAAAAGGAAGCAAATGAGGGCTTTAGAACAAAGAATAAGTGAGAGTGGTGAATCTTCAGTAACTAACTCATCACTGGTTGAACTGCAGCAGACAGTCACAAGATTAATGACCCAGTGTAATGAGAAGGAGTTTGAGCTGGAGATTAAATCTGCAGACAACCGTGTCCTTGAAGAACAATTGAACAGTAAGTGTTCTGAAAATATTGAATTGCAAGAAAAGGTGAAGTTGCTAGAGCAGCAACTGGCAACAGCTACTAGTGGTAACTTGGTGCTTACTGATCAATGTCCGTCTGGAGAACACATTGATGAGTTGAAAAGGAAAATACAGTTCCAGGAGATTGAAAATGAAAAATTGAAACTAGAACAAGTTCACTTGTCAGAAGAGAATAGTGGGTTGCATGTGCAGAACCAGAAACTCTCTGAAGAAGCTTCTTATGCGAAAGAGCTGGCCTCTGCTGCTGCTGTGGAACTGAAGAATTTAGCTGCAGAAGTGACAAAAATTTCATTGCAGAATGCAAAGTTGGAAAAGGAATTGATGGCTGCCAGAGACCAGGCTAATGCTCGAAGCACTGTCATACAAACAGTTAGTGGGGTTAGCCGCAAGTTCAATGATGCAAGATCTGGGAGGAAGGGGAGAATTTCTAGCCGTGCTAATGAAAACTTGGTACCTGCCATAGATGAGTTCGAGTCATGGACTCTTGAAGCTAATGATCTAAAGATGGAACTGCAGGCTAGGAAACAACGAGAGGCAGCTCTTGAGGCTGCATTGGCTGAAAAGGAATTTGTGGAAGAGGAGTACAAGAAAAGGTTTGAAGAGGCAAGGAAAAGAGAAGCTTCCTTGGAGAATGATTTAGCAAATATGTGGGTCCTTGTTGCGAAGTTAAAGAAAGAAGGGGTTGCTGTCACAGAGTCGAACATTAATAAGGAAAATGTTGATGGGGAAGCACCCACGGATGATACTAAAACTAATGACATCGAAAATGATACTATCCCCAAAGAACAAATTTTGGATGGATCAGAACCAGGCAATGAACTTCCCAAGGAAGAACCTTTGGTTGTTCGTCTTAAGGCACGAATGCAAGAGATGAAGGAGAAAGAGCTCAAGCATCTTGGCAACGGAGATGCCAATTCCCATGTTTGTAAAGTATGTTTTGAATCTTCAACTGCAGCAATTCTTCTTCCATGCCGTCATTTTTGTTTGTGTAAATCTTGTTCACTCGCTTGTTCTGAATGTCCAATATGCCGCACAAGTATTGCAGATAGGCTTTTTGCTTTCACATCTTGA 3276 0.4307 MASSSSRARSSSPFSHRKPSTPSYSPASSSYSSFTNGKLMPRSCSSSASSFFNSADCGGRSIAPSRSESSTFYAAYDCGGGGGGGSSTLEFGMEDVIAEPVDSSRSSDSISVTIRFRPLSEREYQRGDEIAWYADGDKFVRNEYNPATAYGFDRVFGPHTITDEVYEVAAKPVVKAAMEGVNGTVFAYGVTSSGKTHTMHGDQDSPGIIPLAIKDVFSIIQDTPGREFLLRVSYLEIYNEVINDLLDPTGQNLRVREDAQGTYVEGIKEEVVLSPGHALSFIAAGEEHRHVGSNNFNLFSSRSHTIFTLMIESSAHGEDYDGVIFSQLNLIDLAGSESSKTDTTGLRRKEGSYINKSLLTLGTVIGKLSEGKASHVPYRDSKLTRLLQSSLSGHGHVSLICTVTPASSNMEETHNTLKFASRAKRVEIYASRNKIIDEKSLIKKYQREISVLKYELDEMKKGMQLGVSHEEIISLKQKLEEGQVKMQSRLEEEEEAKVALMSRIQRLTKLILVSSKNAIPGYLTDIPGHKRTYSADEEDKHDVLRDGSLLIENERKVDDATLSSDLSHDVRHRRSSSRWNEELSPSSSFITESTQAGELISGRRAPAGGITMSDQMDLLVEQVKMLAGDIAFSTSTLKRLTEQSVNDPEGSKTQIESLEQEILEKRKQMRALEQRISESGESSVTNSSLVELQQTVTRLMTQCNEKEFELEIKSADNRVLEEQLNSKCSENIELQEKVKLLEQQLATATSGNLVLTDQCPSGEHIDELKRKIQFQEIENEKLKLEQVHLSEENSGLHVQNQKLSEEASYAKELASAAAVELKNLAAEVTKISLQNAKLEKELMAARDQANARSTVIQTVSGVSRKFNDARSGRKGRISSRANENLVPAIDEFESWTLEANDLKMELQARKQREAALEAALAEKEFVEEEYKKRFEEARKREASLENDLANMWVLVAKLKKEGVAVTESNINKENVDGEAPTDDTKTNDIENDTIPKEQILDGSEPGNELPKEEPLVVRLKARMQEMKEKELKHLGNGDANSHVCKVCFESSTAAILLPCRHFCLCKSCSLACSECPICRTSIADRLFAFTS* 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0459 1091 Coils Coil 899 947 - -
Lja3g0459 1091 ProSitePatterns Kinesin motor domain signature. 326 337 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja3g0459 1091 SMART kinesin_4 107 434 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g0459 1091 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 463 IPR027417 -
Lja3g0459 1091 Pfam Kinesin motor domain 115 426 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g0459 1091 ProSiteProfiles Zinc finger RING-type profile. 1044 1079 IPR001841 -
Lja3g0459 1091 Coils Coil 442 462 - -
Lja3g0459 1091 Coils Coil 476 510 - -
Lja3g0459 1091 ProSiteProfiles Kinesin motor domain profile. 109 426 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g0459 1091 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1018 1088 IPR013083 -
Lja3g0459 1091 Coils Coil 717 751 - -
Lja3g0459 1091 Gene3D Kinesin motor domain 100 456 IPR036961 -
Lja3g0459 1091 Coils Coil 655 675 - -
Lja3g0459 1091 PRINTS Kinesin heavy chain signature 294 311 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g0459 1091 PRINTS Kinesin heavy chain signature 327 345 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g0459 1091 PRINTS Kinesin heavy chain signature 376 397 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g0459 1091 PRINTS Kinesin heavy chain signature 180 201 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g0459 1091 SUPERFAMILY RING/U-box 1043 1083 - -
Lja3g0459 1091 Pfam Zinc finger, C3HC4 type (RING finger) 1042 1083 - -
Lja3g0459 1091 Coils Coil 821 848 - -
Lja3g0459 1091 PANTHER KINESIN-LIKE PROTEIN KIN-7D, MITOCHONDRIAL 68 1052 - -
Lja3g0459 1091 PANTHER CENTROMERE PROTEIN E 68 1052 - -
Lja3g0459 1091 Coils Coil 765 792 - -
Lja3g0459 1091 MobiDBLite consensus disorder prediction 1 34 - -
Lja3g0459 1091 CDD KISc_CENP_E 112 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0459 Lja-Chr3 4665059 4675851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0459 38 1091 Miscellaneous Gene Families AT4G39050 69.991 0.0 1444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0459 K11498 - gmx:100800460 1663.28