Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0452 ATGGCACTCAAACTTCATCCTTCGGTTACACCTCTCTCTCTTCACACCTTTCCCCGCCAAAACCCTAATCTCACACCACCGCGTTCTCTCTCTGTAACCGTTTCTAACCGCCACCTTCGTCTCCTTTTCCGCGCACATTCCCTTTCTGCAAATCCACGCCTCACGTTGTTCCACCGCACCCGGTTCCGCACCACCGCTCGTGCGATTCGAGGTCAAGAACTCACCGGTGACGGCCTCCAACAATCTTCAACCGAAGAAGAACACCATGGCCAAATCACCGAAGACGAAGAAGAGGAAGGTGGGAAAAAGGAACTCACGAAGCAGGATATGTGGAGTCAGATGAAGGAAATTGCAATGTTTACAGGTCCTGCTGTTGGACTTTGGATATGTGGACCGCTTATGAGTCTCATTGATACTGCTGTTATTGGTCAGGGAAGCTCCATTGAGCTTGCTGCATTAGGTCCTGCTACTGTTGTTTGTGATAACTTGAGCTATGTGTTCATGTTTCTATCAGTTGCTACTTCCAATATGGTTGCTACTGCCCTTGCTAAACAGGATAGGGAAGAAGTGCAGCATCACATATCTGTCTTGCTTTTTATTGGGCTAGCTTGTGGTTTCATGATGCTTTTATTCACAGGGCTATTTGGTGCTGCAACGCTCACTGCTTTCACAGGTCCTAAGAATGTACATGTAGTACCTGCAGCCAACACCTATGTACAGATTCGAGGCTTGGCATGGCCTGCTTTACTTGTTGGATGGGTTGCTCAGAGTGCAAGTCTTGGCATGAAAGATTCTTGGGGACCCTTGAAGGCTTTGGCAGCTGCTAGTGTTATAAATGGCATTGGTGATATAGTTTTGTGCATCTATTTAGGCTATGGAATTGCAGGAGCTGCATGGGCTACAATGGCATCACAAGTTGTTGCTGCTTATATGATGATGCAAGCGCTAAACAAGAAGGGATATAATGCTTTTGCCTTCTCCATCCCTTCAGGAAAGGAACTTCTGATGATATTTCGCCTTGCTGCTCCTGTATTTATGACAATGATGTCAAAGGTGGCTTTCTACTCACTACTTGTATATTTTGCTACATCAATGGGTACACATACAATGGCTGCTCATCAGGTCATGGTCCAAACATTTTGCATGTGTACAGTGTGGGGTGAACCTCTGTCCCAAACTGCTCAGTCTTTTATGCCTGAATTGATATATGGAGTAAACCGGAGTTTGTCAAAGGCCCGGATGCTTTTGAGGTCTCTTGTGATAATTGGAGCCACACTTGGATTGTTGTTAGGAATTGTTGGAACCTCAGTTCCTTGGTTATTTCCCTATGTTTTTACACCTGATCAGATGGTCATCCAGGAGATGCATAAAGTGCTGATTCCATACTTCATAGCCCTGGCTGTGACGCCCCCTACTCATAGCCTTGAGGGAACGTTGCTGGCTGGGAGGGATCTAAGATATATAAGTTTGTCAATGGGCGGATGCTTTTGCGTGGGTGTACTAGTACTATTGTTCTTGAGTAGCAGATACGGTTTGCAAGGTTGTTGGTTTGCCCTTGCATTATTTCAATGGGCTCGGTTTTCATTGGCCCTCCAGCGTCTTCTTTCTCCCACTGGCATTTTATACGCGGAAGATATTAACCAGAATGAGCTGCAAAAGCTAAAGACTGCTTAA 1674 0.4582 MALKLHPSVTPLSLHTFPRQNPNLTPPRSLSVTVSNRHLRLLFRAHSLSANPRLTLFHRTRFRTTARAIRGQELTGDGLQQSSTEEEHHGQITEDEEEEGGKKELTKQDMWSQMKEIAMFTGPAVGLWICGPLMSLIDTAVIGQGSSIELAALGPATVVCDNLSYVFMFLSVATSNMVATALAKQDREEVQHHISVLLFIGLACGFMMLLFTGLFGAATLTAFTGPKNVHVVPAANTYVQIRGLAWPALLVGWVAQSASLGMKDSWGPLKALAAASVINGIGDIVLCIYLGYGIAGAAWATMASQVVAAYMMMQALNKKGYNAFAFSIPSGKELLMIFRLAAPVFMTMMSKVAFYSLLVYFATSMGTHTMAAHQVMVQTFCMCTVWGEPLSQTAQSFMPELIYGVNRSLSKARMLLRSLVIIGATLGLLLGIVGTSVPWLFPYVFTPDQMVIQEMHKVLIPYFIALAVTPPTHSLEGTLLAGRDLRYISLSMGGCFCVGVLVLLFLSSRYGLQGCWFALALFQWARFSLALQRLLSPTGILYAEDINQNELQKLKTA* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0452 557 PANTHER PROTEIN DETOXIFICATION 46, CHLOROPLASTIC 39 546 - -
Lja3g0452 557 CDD MATE_DinF_like 113 536 IPR044644 -
Lja3g0452 557 MobiDBLite consensus disorder prediction 82 104 - -
Lja3g0452 557 MobiDBLite consensus disorder prediction 69 104 - -
Lja3g0452 557 TIGRFAM matE: MATE efflux family protein 123 516 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja3g0452 557 Pfam MatE 129 281 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja3g0452 557 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 39 546 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0452 Lja-Chr3 4603536 4609127 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0452 K03327 - gmx:100778835 767.303