Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0451 ATGGCACTTAAACTCTCACTCATCATGGATCGCACTCTTCTTCACTCTTCTCCCTTCAAAAACCCAAACCTCTTCGCATCACCACCTTCAAACCACCGTCACCTACCTCTTCGTTTCCGTCCTGCACCTTCCCTCATTCATTCACCGTCGATACGACGCCGCACTGGAATCGTAACCGCTAGCGTAGTTGGAGGAGGTTACGACGAATCCGAAGAAGTGGTGGAGAAAAAGGAACTGGCAGAACAGAGTGTGTGGAGTCAGACGAAGGAAATTGTTAAGTTCACAGCACCAGCAATGGGGCTTTGGTTGTGTGATCCATTGATGAGTCTCATCGACACTGCTGTTGTTGCTCATGGAAGCTCAACTGAACTTGCTGCTTTAGGTCCTGCTACGGTAGTTTGTGATTATATGACCTTAACCTTCATGTTTCTGTCGGTTGTTACTTCCAATATAATTGCTACTGCCCTTGCTAAACAGGATGAAGAGGGTGTGCAGCATCACTTATCTGTCCTGCTTTTTGTTGGGTTAGCATGTGGCTGTGTGATGCTCTTATCTACAAAGTTATTCGGTGCAGCAGCACTCACCGTTTTTACTGGGCCAAAGAATGTGCATGTAGTACCTGCAGCAAATACTTATGTCCAGATTCGAGCCTTGTCATGGCCTGCTTTACTTGTTGGATGGGTTGCTCAGAGTGCAAGTCTTGGTATGAAAGATTCCTGGGGACCCTTGAAGGCTTTAGCTGCTGCCAGTATTATAAATGGAGTTGGTGATATACTTCTATGCAGTTGTTTAGGCTATGGTATTGCAGGAGCCGCTTGGGCCACAATGGCATCACAAGTTGTTGCTGCGTATATGATGATTCAAGCACTAAACAATAAGGGATACAATGCACTTGCCTTCTCCATTCCTACAAGGAAGGAATTTCTGAAAATACTTGGTCTTGCTGCTCCTGTATATGTGACGTCGATATCAAAGGTGGCTTTCTTCTCTCTACTTATGTATGTTTCTACATCAATGGGAACACAAACAATAGCCGCTCATCAGGTCATGATTCAAATCTACATGGCGTGTACAGTGTGGGGTGAACCTCTTTGCCAAACTGCTCAATCATATATGCCTGAGTTGATGTATGGAGTGAATAGGAGTTTGGCAAAGGCCCGATTGCTTCTAAGGTCTCTTGTAATTATTGGAGCTATACTTGGTTTACTGTTAGGGATAGTTGGAACATCTCTTCTTTGGTTATTCCCCTACATTTTTACACCTGATCAGATGGTCATCCAAAAGATGCATAGGACACTGATTCCATTCTTTCTAGCACTAGCTGTGACACCCCCTACTCGAAGCCTAGAGGGAACATTGCTGGCTGGGCAGGATCTTAGATTTATAAGTTTGTCAACATGTGGATGCTTTTGTCTGGGTGCTCTAGTATTATTGATCTTTAGTAGATATGGTTTGCTAGGCTGTTGGTTTACCCTTGCTGGATTTCAGTGGGCTCGGTTTTTAGTGGCCCTTCTGCGCCTTCTCTCTCCTAGTGGCATTCTACAGACGGAAGAAACCAGGATAAGCCAAAAGTTGAGGACTGCTTAG 1587 0.4486 MALKLSLIMDRTLLHSSPFKNPNLFASPPSNHRHLPLRFRPAPSLIHSPSIRRRTGIVTASVVGGGYDESEEVVEKKELAEQSVWSQTKEIVKFTAPAMGLWLCDPLMSLIDTAVVAHGSSTELAALGPATVVCDYMTLTFMFLSVVTSNIIATALAKQDEEGVQHHLSVLLFVGLACGCVMLLSTKLFGAAALTVFTGPKNVHVVPAANTYVQIRALSWPALLVGWVAQSASLGMKDSWGPLKALAAASIINGVGDILLCSCLGYGIAGAAWATMASQVVAAYMMIQALNNKGYNALAFSIPTRKEFLKILGLAAPVYVTSISKVAFFSLLMYVSTSMGTQTIAAHQVMIQIYMACTVWGEPLCQTAQSYMPELMYGVNRSLAKARLLLRSLVIIGAILGLLLGIVGTSLLWLFPYIFTPDQMVIQKMHRTLIPFFLALAVTPPTRSLEGTLLAGQDLRFISLSTCGCFCLGALVLLIFSRYGLLGCWFTLAGFQWARFLVALLRLLSPSGILQTEETRISQKLRTA* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0451 528 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 66 519 IPR044644 -
Lja3g0451 528 PANTHER PROTEIN DETOXIFICATION 46, CHLOROPLASTIC 66 519 - -
Lja3g0451 528 Pfam MatE 103 255 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja3g0451 528 CDD MATE_DinF_like 89 509 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0451 Lja-Chr3 4597631 4603330 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0451 K03327 - mtr:MTR_4g071390 785.793