Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0439 ATGGCCTCTGCAGCATCAGCATCTCTGCTCAAGTCTTCTCCTGTTCTTGACAAGTCTGAGTGGGTGAAGGGCCAAACCCTTCGCCAACCTGCTGTATCAGTTGTGAGATGCAACCCCACCACCAACCCATCAGGCCTCACCATCAGAGCTGGTTCCTATGCTGATGAGCTTGTTAAGACTGCGAAAACTGTTGCTTCACCAGGGCGTGGTATTTTGGCCATGGATGAGTCAAATGCTACCTGTGGGAAGCGTTTGGCTTCAATTGGGCTAGAGAACACCGAAGTTAACCGCCAAGCATACCGTACTCTTCTTGTGTCTGCTCCAGGCCTTGGCCAGTACATCTCTGGTGCCATTCTCTTTGAGGAAACTCTCTACCAATCCACAACTGATGGCAGGAAGATTGTTGATGTACTTATTGAACAGAACATCGTTCCTGGTATTAAAGTTGACAAGGGTTTGGTACCACTGGCTGGTTCCAATGATGAATCATGGTGCCAAGGTCTGGATGGTCTTGCCTCTCGCTCAGCAGCATACTACCAACAAGGTGCCCGATTCGCCAAATGGCGTACCGTTGTGAGCATCCCCAACGGTCCCACTGCTTTGGCAGTTAAGGAAGCAGCCTGGGGTCTGGCTCGTTATGCTGCAATTTCTCAGGACAATGGGCTAGTTCCAATTGTGGAGCCTGAGATCCTGCTTGACGGTGAGCATGATATTGAAAGGACTTTTGAGGTAGCCCAAAAGGTGTGGGCTGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCTGTTTGAGGGTATTCTCCTCAAGCCTAGCATGGTTACCCCTGGAGCTGAGAGCAAGGACAAGGTCTCTCCTCAGACGGTTTCTGATTACACCCTCAAGCTCCTTAAAAGGAGAATTCCCCCTGCTGTCCCTGGAATCATGTTTTTGTCTGGTGGACAATCTGAGGTTGAAGCAACCCTGAACTTGAATGCCATGAACCAATCTCCAAACCCATGGCATGTGTCGTTCTCGTTTGCAAGAGCTCTCCAAAATACCGCCTTGAAGACATGGGGGGGTCGCGCGGAGAACGTGAAGGCAGCACAAGATGCACTCCTTTTCCGTGCTAAGAGCAACTCACTGGCTCAGCTTGGGAAGTACAATGGTGATGGTGAATCTGAGGAGGCCAAGAAGGAGTTGTTCGTCAAAGGATACTCCTATTAA 1203 0.4996 MASAASASLLKSSPVLDKSEWVKGQTLRQPAVSVVRCNPTTNPSGLTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEVNRQAYRTLLVSAPGLGQYISGAILFEETLYQSTTDGRKIVDVLIEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPTALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHDIERTFEVAQKVWAEVFFYLAENNVLFEGILLKPSMVTPGAESKDKVSPQTVSDYTLKLLKRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSFARALQNTALKTWGGRAENVKAAQDALLFRAKSNSLAQLGKYNGDGESEEAKKELFVKGYSY* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0439 400 SUPERFAMILY Aldolase 47 400 - -
Lja3g0439 400 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 39 400 - -
Lja3g0439 400 Gene3D Aldolase class I 40 399 IPR013785 -
Lja3g0439 400 Pfam Fructose-bisphosphate aldolase class-I 56 400 IPR000741 GO:0004332|GO:0006096
Lja3g0439 400 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 39 400 IPR000741 GO:0004332|GO:0006096
Lja3g0439 400 CDD FBP_aldolase_I_a 54 380 - -
Lja3g0439 400 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 261 271 IPR029768 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0439 Lja-Chr3 4491952 4496291 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0439 53 400 Miscellaneous Gene Families AT3G52930 56.534 5.17e-139 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0439 K01623 - gmx:100818383 737.643