Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0438 ATGGGGGCTATTGCTGGAGAGGAGCTGGTGAAGTGGGAGAAGATGCAAGCATTGAGTAGTTGTGAAGAGAAGATTCTTGTGTTACTGAGGTTGAGGCCTTTGAATGAGAAGGAAATTGCTGCTAATGAGCCAGCAGATTGGGAATCCATTAATGACACCACCATCTTGTACCGGAACACGCTACGTGAGGGTTCCACATTCCCAAGTGCCTACACATTTGACAGAGTTTTTCCGGGTGACTCTGCCACAAGGCAAGTATATGAGGAAGGAGTCAAAGAAATTGCTCTTTCAGTTGTTGGTGGCATTAACTCGAGTATTTTTGCATACGGGCAAACAAGTAGTGGAAAGACATACACGATGGTTGGAATAACTGAAAATGCTGTGGCAGATATTTTTGACTACATCAAGAGGCATGAAGAACGAGCATTTGCAGTGAAGATCTCAGCAATTGAAATTTACAATGAAGTTGTTAGAGACCTCCTCAGCACTGACAACACTCCACTTAGGCTGCGTGATGATCCTGAGAGAGGACCAATTTTAGAAAAACTTACTGAGGAGACTCTACGGGACTGGGGGCATTTGAAAGAGCTCCTATCTTTCTGTGAAGCTCAGAGACAGGTAGGAGAGACATACCTGAATGAAAAGAGTTCTAGATCTCATCAAATTATCAGATTGACGATAGAAAGTTCTGCTAGGGAATTCCTGGGCAAAGGAAACTCAACCACCCTATCAGCTAGTGTGAATTTTGTTGATTTAGCAGGGAGCGAGCGTGCATCTCAGGCATCATCAGCTGGGATGAGATTGAAAGAAGGTTGCCATATAAACCGGAGCTTACTTACTCTTTCAACAGTCATTCGTAAACTTAGTAAGGGAAGAAATGGACATGTCAATTACAGAGATTCCAAGTTGACACGCATACTGCAGCCTTGCTTGGGTGGCAATGCTAGAACAGCCATCATTTGCACTTTGAGCCCTGCGCGAAGCCATGTTGAGCAAACCAGAAACACACTTCTTTTCGCTTGTTGTGCAAAAGAAGTGACCACAAAAGCGCAGGTTAATATAGTGATGTCTGATAAGGCTTTGGTCAAGCACTTGCAGAAAGAGGTTGCCAGATTGGAGAGTGAGTTGAAAACTCCTGTTCCCGCTACCTCCAATAGTGACTACGCAGCAATGTTGAGAAAGAGGGATCTCAAGATAGAAAAGATGGAGAAGGAAATTAGGGACCTAACTGAGCAACGTGATCTTGCTCAATCAAGGATTGAGGATTTGCTACGCATGGTCGGAAAGGAGCAGATATCTAGAGATGAAGGGGAAGATGCCTGGGAAGATGACAGTTCCGTATCAGAGTCATCAAGCATTTATAGTTCTCGTCAAGGTCCTGATAGACGCATCAGAGAGTTCAACAATCCTCACTATAATGATGGAGACAGTGACCCTGATGAATACTGCAAAGAAGTTCGATGTGTTGAGTTAGAAGAGTCAAGTAAAGACAACTCAGAAGTTCTGGATCCGTCGCTAAGTGACAATGGAGAGGAAAATAGAACCAGCCAGGAAATATCTTCACGTTTGAATGAAGGGAACTCAACATATGGTGTTCTGGAGCAGAGACTGCAAGATGTACAATCAACCATTGATTCTCTTGTAGGTCCTTACCCTGATGAAAATTCCCCACAGGCCATGTCAAGTTATAGGAATGTCAAATTAACTAGAAGCCGGAGCTGTACTGAGTATCACTTGACTAGTTCTCCTATGATAGAAGGAGAAACTCAGAGGACTCCAGCCTATGGATTTGATAAAGGATTCCCTGGAAGGCCAGACGGTTTGTGGCGAAAGTTCCCTCCATTAAACTATGATGGTTCCGCAGAATTCTCGAGGAATGATTCTCAGTCTTCTGTGAGAACATCAGCTGATGAGGATATTACTAGCATCCAGACTTTTGTTGCTGGGATGAAAGAAATGATCCAACATGAATATGAGAAGCAGCTTGTTGATGGCCAGGAGCAGGAAACAGAAAGGAAACCATTTCAGAGGAATGTGAAAGATACAGGTGTAGATCCAATGCTGGAGGCACCTGGAACTCCTTTAGACTGGTCTCTGCAATTCAAGAGGCAACAGAAAGAGATAATTGAACTGTGGCAGTCTTGCTGTGTGCCATTGACCCACAGGACCTACTTCTTTATTCTGTTCAGGGGTGATCCAAAAGACTCCATTTACATGGAGGTAGAGATTAGAAGATTATCTTTCCTGAAAGAAACATTTTTTGATGAAAACCAGTCTGATAGCGACAGTCAGATAATCACACTAGCTTCAAGTGTGAAAGCTCTTCGCCGAGAGAGAGAAATGTTTGTGAAGCTTATGCAGAAGAGGCTTTCGGAGGAAGAGAGAAAGAGGCTCTTCAAGGAGTGGGACATTCCATTGAATTCAAAGCGCAGGAGGATGCAGCTAGCGAATCGTTTATGGAGCAACACTGACATGAACCACATAATGCAGAGTGCCACAGTAGTTGCAAAGTTGGTTAGGTTTTCAGAGCAGGGCAAGGCACTGAAAGAGATGTTTGGGCTTAGCTTCACACCACAACTCACACGGCGGAGATCCTATTCATGGAAGAATGGCAGAGCATCTCTACCATAG 2631 0.4401 MGAIAGEELVKWEKMQALSSCEEKILVLLRLRPLNEKEIAANEPADWESINDTTILYRNTLREGSTFPSAYTFDRVFPGDSATRQVYEEGVKEIALSVVGGINSSIFAYGQTSSGKTYTMVGITENAVADIFDYIKRHEERAFAVKISAIEIYNEVVRDLLSTDNTPLRLRDDPERGPILEKLTEETLRDWGHLKELLSFCEAQRQVGETYLNEKSSRSHQIIRLTIESSAREFLGKGNSTTLSASVNFVDLAGSERASQASSAGMRLKEGCHINRSLLTLSTVIRKLSKGRNGHVNYRDSKLTRILQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNIVMSDKALVKHLQKEVARLESELKTPVPATSNSDYAAMLRKRDLKIEKMEKEIRDLTEQRDLAQSRIEDLLRMVGKEQISRDEGEDAWEDDSSVSESSSIYSSRQGPDRRIREFNNPHYNDGDSDPDEYCKEVRCVELEESSKDNSEVLDPSLSDNGEENRTSQEISSRLNEGNSTYGVLEQRLQDVQSTIDSLVGPYPDENSPQAMSSYRNVKLTRSRSCTEYHLTSSPMIEGETQRTPAYGFDKGFPGRPDGLWRKFPPLNYDGSAEFSRNDSQSSVRTSADEDITSIQTFVAGMKEMIQHEYEKQLVDGQEQETERKPFQRNVKDTGVDPMLEAPGTPLDWSLQFKRQQKEIIELWQSCCVPLTHRTYFFILFRGDPKDSIYMEVEIRRLSFLKETFFDENQSDSDSQIITLASSVKALRREREMFVKLMQKRLSEEERKRLFKEWDIPLNSKRRRMQLANRLWSNTDMNHIMQSATVVAKLVRFSEQGKALKEMFGLSFTPQLTRRRSYSWKNGRASLP* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0438 876 MobiDBLite consensus disorder prediction 493 528 - -
Lja3g0438 876 PANTHER CENTROMERE PROTEIN E 6 875 - -
Lja3g0438 876 Coils Coil 355 375 - -
Lja3g0438 876 PRINTS Kinesin heavy chain signature 101 122 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g0438 876 PRINTS Kinesin heavy chain signature 296 317 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g0438 876 PRINTS Kinesin heavy chain signature 246 264 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g0438 876 PRINTS Kinesin heavy chain signature 210 227 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g0438 876 Pfam Kinesin motor domain 30 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g0438 876 MobiDBLite consensus disorder prediction 459 481 - -
Lja3g0438 876 ProSiteProfiles Kinesin motor domain profile. 24 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g0438 876 PANTHER KINESIN-LIKE PROTEIN KIN-7F 6 875 - -
Lja3g0438 876 ProSitePatterns Kinesin motor domain signature. 245 256 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja3g0438 876 CDD KISc_CENP_E 24 346 - -
Lja3g0438 876 Coils Coil 392 426 - -
Lja3g0438 876 SMART kinesin_4 22 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g0438 876 MobiDBLite consensus disorder prediction 500 528 - -
Lja3g0438 876 MobiDBLite consensus disorder prediction 431 481 - -
Lja3g0438 876 Pfam Domain of unknown function (DUF3490) 700 859 IPR021881 -
Lja3g0438 876 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 377 IPR027417 -
Lja3g0438 876 Gene3D Kinesin motor domain 16 377 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0438 Lja-Chr3 4467565 4488092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0438 21 427 Miscellaneous Gene Families AT5G06670 38.499 8.23e-79 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0438 K11498 - gmx:100820012 1343.18