Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0399 ATGTCAACTCTCAAACTTCTCTTCATCACCTTGCTTTCCATCATTGTTTCGTCGGCCATCATTGCCACCGCCGATGAGGCCAAGAACTCTGTAACTTATGATGGCAGGTCACTCATTATCAATGGAAAACCGGAGCTACTCTTCTCCGGTTCCATTCATTACCCGCGAAGCACCCCAGAGATGTGGCCTGATCTTCTTGACAAGGCAAAACATGGAGGTTTGAACGTGATCCAAACGTATGTGTTTTGGAACATTCATGAACCTGAGAAAGGCAGCTTAAAATTCGAAGACAACTATGATTTGGTAAAGTTCATCAAGCTCGTACAAGAGAAAGGAATGTATGTAACCCTCAGGGTTGGGCCTTTCATTCAAGCTGAATGGAATCACGGAGGCCTTCCATATTGGCTAAGAGAGGTCCCTGACATCATATTCCGTTCTAACAATGAACCCTTTAAGAATTACATGAAAAAATATGTATCAGCCATTATAGAAAAGATGAAAGAGGAGAAGCTCTTTGCTCCCCAAGGAGGCCCCATCATCTTGGCACAGATTGAGAATGAATACAACCATGTCCAACTTGCTTATGAAAAGGACGGGGATGATTATGTGCAATGGTCTGCAAATATGGCAGTGGCAATGGATATTGGAGTTCCATGGATCATGTGCAAGCAGAAGGATGCTCCTGATCCAGTGATTAATGCATGCAATGGAAGGCACTGTGGTGATACCTTTACAGGCCCAAACAAACCATACAAGCCTTCCTTATGGACTGAAAACTGGACTGCACAGTATAGAGTTTTTGGAGATCCACCATCCCAAAGATCTGCTGAAGACATTGCCTTCTCAGTTGCCCGCTTCTTCTCTAAGAATGGGGCTTTGGTCAACTACTACATGTACCATGGAGGAACAAACTTTGGTAGAACAACCTCTGCATTTACAACAACTCGTTACTACGATGAAGCTCCTCTTGATGAGTTTGGTCTGCAGAGAGATCCAAAATGGAGTCACCTGAGGGATGCGCATAAGGCTGTGAGCCTATGTAAAAAGGCTCTTCTCACGGGAAAGCCTAGTTCCACAAAATTAAGCCGATATCATGAGGTTATAGTGTATGAGAAAGAAGGAACTGATTTGTGTGCTGCTTTCATCACAAACAACCACACCAAAACAGCAAAAAGTATAAACTTCAAAGGCTCAAAATATTATTTGCCACCGCGTTCCATCAGCATCCTCCCTGATTGCAAGACTGTTGTGTTCAACACCCAAAATATTGCTTCACAACATAATTCAAGAAACTTCGAGGAGTCAAAGGTTGCAAACAATCATAAGTGGGAGGTGTTTTCTGAGAGCATTCCAACCACCAAGGAATTGAAAACTGATAGTGAGGTTCCTGCAGAGCTTTACAGCTTGCTTAAAGACACCACTGACTATGGATGGTACACCACAAGCGTGGAATTAGGTCCAGAAGATTTGCCAAAGAAGAATGGTGTATCCCCGGTTCTTCGAATTATGAGTCTAGGACATACATTGCATGCCTTTGTAAATGGAGAATACATTGGATGTGGTCATGGTAGCCATGAGGAGAAATCTTTTGAATTCCAGAAACCTGTAGAGCTAAAGGTTGGAGTTAACCAGCTAGCTGTGCTGGCTACCACAGTGGGACTCCCAGATAGTGGAGCATACATGGAGCACAGGTATGCTGGGCCCAAGTCTATATTCATCATTGGTCTTAACTCTGGAAAAATTGATCTAAGTCTCAATGGTTGGGGTCATCAGGTTGGTCTCAAAGGTGAGAAGAATAAAATTTTCACCGAGAAGGGATCAAAGAAAGTAGAATGGAAGGATGTCAAGGGACCTGGACCTGTTCTCTCATGGTACAAGACAAATTTTGCAACCCCTGAGGGAAGGGATCCAGTTGCCATTAGGATGGAGGGTATGGGGAAGGGAATGGTTTGGATCAATGGTAAAAGCATTGGTCGTCATTGGATGAGTTACCTCTCTCCCCTTGGGAAGCCTACACAGTCAGAATACCATATCCCAAGATCTTACCTCAATTCAAAAGACAACTTGCTTGTTGTGTTTGAGGAAGAGGTAGCTAGTCCAGAAAAGATTGCCATCCTAAATGTCAACAGAGATACAATATGTAGTTTCATTACAGAAAACCATCCCCCCAATGTAAAGTCATGGTCATATAAGAACAATAAATTTCAATCTGTGGTGGATAATCCAGCCCCAGAAGCTACACTCAAGTGTCCAAACAGAAAAACCATTAAGGCTGTGGAATTTGCAAGCTTTGGTGATCCTGAAGGTTACTGTGGAGAATTTACTATGGGAAAATGCAATGCACCTGACACACAGAAGATAGTTGAACAGACATGCTTAGGAAAAGAAGGTTGTTCAGTTCCATTGGACAGAGCAACCTCCCATGATGCTTGCCCAGATGTGACAAAGGCACTTGCAATCCAAGTGAAGTGTGGTTTTTAG 2481 0.4321 MSTLKLLFITLLSIIVSSAIIATADEAKNSVTYDGRSLIINGKPELLFSGSIHYPRSTPEMWPDLLDKAKHGGLNVIQTYVFWNIHEPEKGSLKFEDNYDLVKFIKLVQEKGMYVTLRVGPFIQAEWNHGGLPYWLREVPDIIFRSNNEPFKNYMKKYVSAIIEKMKEEKLFAPQGGPIILAQIENEYNHVQLAYEKDGDDYVQWSANMAVAMDIGVPWIMCKQKDAPDPVINACNGRHCGDTFTGPNKPYKPSLWTENWTAQYRVFGDPPSQRSAEDIAFSVARFFSKNGALVNYYMYHGGTNFGRTTSAFTTTRYYDEAPLDEFGLQRDPKWSHLRDAHKAVSLCKKALLTGKPSSTKLSRYHEVIVYEKEGTDLCAAFITNNHTKTAKSINFKGSKYYLPPRSISILPDCKTVVFNTQNIASQHNSRNFEESKVANNHKWEVFSESIPTTKELKTDSEVPAELYSLLKDTTDYGWYTTSVELGPEDLPKKNGVSPVLRIMSLGHTLHAFVNGEYIGCGHGSHEEKSFEFQKPVELKVGVNQLAVLATTVGLPDSGAYMEHRYAGPKSIFIIGLNSGKIDLSLNGWGHQVGLKGEKNKIFTEKGSKKVEWKDVKGPGPVLSWYKTNFATPEGRDPVAIRMEGMGKGMVWINGKSIGRHWMSYLSPLGKPTQSEYHIPRSYLNSKDNLLVVFEEEVASPEKIAILNVNRDTICSFITENHPPNVKSWSYKNNKFQSVVDNPAPEATLKCPNRKTIKAVEFASFGDPEGYCGEFTMGKCNAPDTQKIVEQTCLGKEGCSVPLDRATSHDACPDVTKALAIQVKCGF* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0399 826 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 8 821 - -
Lja3g0399 826 Pfam Glycosyl hydrolases family 35 37 343 IPR031330 -
Lja3g0399 826 Gene3D - 732 826 IPR043159 -
Lja3g0399 826 Gene3D - 592 716 - -
Lja3g0399 826 SUPERFAMILY Galactose-binding domain-like 585 733 IPR008979 -
Lja3g0399 826 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 176 188 IPR019801 GO:0004553|GO:0005975
Lja3g0399 826 SUPERFAMILY (Trans)glycosidases 29 347 IPR017853 -
Lja3g0399 826 Pfam Galactose binding lectin domain 748 824 IPR000922 GO:0030246
Lja3g0399 826 Pfam Beta-sandwich domain in beta galactosidase 351 423 IPR041392 -
Lja3g0399 826 ProSiteProfiles SUEL-type lectin domain profile. 744 825 IPR000922 GO:0030246
Lja3g0399 826 PANTHER BETA-GALACTOSIDASE RELATED 8 821 IPR001944 GO:0004553|GO:0005975
Lja3g0399 826 PRINTS Glycosyl hydrolase family 35 signature 174 189 IPR001944 GO:0004553|GO:0005975
Lja3g0399 826 PRINTS Glycosyl hydrolase family 35 signature 311 327 IPR001944 GO:0004553|GO:0005975
Lja3g0399 826 PRINTS Glycosyl hydrolase family 35 signature 620 634 IPR001944 GO:0004553|GO:0005975
Lja3g0399 826 PRINTS Glycosyl hydrolase family 35 signature 41 58 IPR001944 GO:0004553|GO:0005975
Lja3g0399 826 PRINTS Glycosyl hydrolase family 35 signature 647 663 IPR001944 GO:0004553|GO:0005975
Lja3g0399 826 PRINTS Glycosyl hydrolase family 35 signature 255 270 IPR001944 GO:0004553|GO:0005975
Lja3g0399 826 PRINTS Glycosyl hydrolase family 35 signature 62 80 IPR001944 GO:0004553|GO:0005975
Lja3g0399 826 PRINTS Glycosyl hydrolase family 35 signature 117 136 IPR001944 GO:0004553|GO:0005975
Lja3g0399 826 PRINTS Glycosyl hydrolase family 35 signature 292 307 IPR001944 GO:0004553|GO:0005975
Lja3g0399 826 Gene3D Glycosidases 27 347 - -
Lja3g0399 826 SUPERFAMILY Galactose-binding domain-like 407 568 IPR008979 -
Lja3g0399 826 Gene3D - 410 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0399 Lja-Chr3 4112657 4118027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0399 31 825 Glycoside Hydrolase AT2G16730 61.845 0.0 1073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0399 - - gmx:102663614 1367.44