Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0392 ATGTCTCTTCCTCATCAATCTCTCTACCCACAAGTTCACTCCACTAACCCAGACGCAAACTCCCCTTTCTTTCACGCTTCAACCTCCTCTTCAATGTATCCCTCAGTCGGCAATCCCACCACGGCGCAGCAGCCATCGGAGCATGTTCTCGTCACCGTCCCCGGCGTGATTCTGCATCTCATAGAAAAAGACTCCAGCGTCCACCTCGCTTCCGGCGACCTCAACATAATAAGCCTCATGGAAGGGGACAGAGTCGTCACTGTTTTGGCCTCCGTTGGTGATCAAGTTCAGTGGCCGTTAGCTAAGGACGTTTCAGCGGTGAAGCTTGATGACTCTCACTATTTCTTCACGATTAGAGTTCCAAAGGAGGGTGGAGAGTTTGAAGTGCTGAACTATGGTGTCACCGTGGCAGCGGAAGGGAGAGGAAGAGGGAAGGAACTCGATGAGGTTCTGGAGAAGTACTGTTTTCTGTCGGTGGAGAAGGTGGAGGGTTTGGGAAATTGGGCGGTGTTGAAATCAGAGGAGAAGGGAGTGGCGGTGGAGGAGAAATCGGCGGCGTATTGGACCACGTTGGCTCCAAACGTGGAGGATTACAGCAGCCGTTTCGCGAGGTGGATAGCTTCTGGGTCGGGTCAGATGGTGAGGGGGATTCTCTGGTGTGGGGATGTTACTGTGGATAGGTTGAAATGGGGGAATGATTTCTTGAAGAAGAGGTTGCAGCCTGGTGAAAAGAACTCACAAATCAGTCCCCAAGCCATGGAGAGAATGAAAAGGGTTAAGAATTTGACTAAGATGTCAGAGAAAGTGGCCCTTGGAATTCTCTCAGGGGTTGTGAAGGTGTCTGGATTCTTCACTAGTTCAGTAGTCAACTCTAAACCGGGAAAGAAATTCTTCAGCCTTCTTCCCGGAGAAATTGTTCTTGCTTCCATGGATGGATTCAATAAGGTCTGTGATGCTGTAGAAGTAGCTGGAAGGAATGTCATGTCTACTTCATCAGTTGTTACCACCGGACTAGTTTCACATAAATATGGAGAAGAAGCTGCTCAGGTTACAAATGAAGGCCTTGATGCTGCAGGGCATGCAATTGGAACAGCTTGGACTGTGTTCAAACTTAGGAAAGCACTCAACCCAAAGAGTGTGATCAAACCAACAACACTAGCTAAAGCTGCTGCCCGAGCAAGCTCTGCTGAACTGAAGGCTAAGAAATAA 1209 0.4905 MSLPHQSLYPQVHSTNPDANSPFFHASTSSSMYPSVGNPTTAQQPSEHVLVTVPGVILHLIEKDSSVHLASGDLNIISLMEGDRVVTVLASVGDQVQWPLAKDVSAVKLDDSHYFFTIRVPKEGGEFEVLNYGVTVAAEGRGRGKELDEVLEKYCFLSVEKVEGLGNWAVLKSEEKGVAVEEKSAAYWTTLAPNVEDYSSRFARWIASGSGQMVRGILWCGDVTVDRLKWGNDFLKKRLQPGEKNSQISPQAMERMKRVKNLTKMSEKVALGILSGVVKVSGFFTSSVVNSKPGKKFFSLLPGEIVLASMDGFNKVCDAVEVAGRNVMSTSSVVTTGLVSHKYGEEAAQVTNEGLDAAGHAIGTAWTVFKLRKALNPKSVIKPTTLAKAAARASSAELKAKK* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0392 402 MobiDBLite consensus disorder prediction 1 24 - -
Lja3g0392 402 Pfam Senescence domain 204 391 IPR009686 -
Lja3g0392 402 PANTHER SPARTIN 4 401 IPR045036 -
Lja3g0392 402 Coils Coil 386 402 - -
Lja3g0392 402 PANTHER OS06G0717100 PROTEIN 4 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0392 Lja-Chr3 4014010 4016487 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0392 K19366 - gmx:100802385 558.525