Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0388 ATGGTGAGTAGTGATGATCCCAATCACAAACCCGATTCTTCTCTATACGAATCTTCAGCTGCACAACCCTTTCTACCAAAACCCCATTACCCTTCTTCTTCTTCTTCTCCAATCGAAGAACACGATTCTCATGAATCAGAGTCAAACCAGCAATACCTTCACATCTCTTACAATCACGGTCCTCGTTCCTTCAAGGACCTTCCATTCCTCATCCTCTTCCTCCTCCTCGTCCTGTCCACCTTCGCATTCGGAATCTTCTCCATCTTCCACCGCAACACCACCTACTCCTCCCTCTCCTCTTACTCCTACGACTCCACCACCACCTCCTGCACCAAAAACACCACGTTTTCTTCATCTTCTGCGTCTTCCCCCAACTGGGTCTCGCTCAATTTCTATTCATCGTCTTCCTCGCCTCTCGTCAAGGATTTGATATGGACACTGGTGATTACCTTCGCTTTCAGCGTGCCCATGTGCTGGGGTTTGCTTCTCTTACTCAAGCATTACACCAAACAGCTTGTCTACGTTGCGATTCCGTTCTTCATCGCCATACCCATCTTCCTCAACGTGTACTGGTTCGTTGCCTGCACTGTCAGCACCTCTTGCAGTGACGCTTTTCCTCTGGCGTACAGGATTCTAGTGCTGGTGTTCATCTTTTTGGTGATTGGGGTCATCGTGTGGATCTTGGTGGTGAATTGGCATCGGGTGGAGCTCACGGTTAGGATAATCGGTGTGGCTTCCGACGCGCTTTCCAGGAATCTGGGATTGTTTGGGGTGCTGCCCTGTTTGACGATCGGGCTTGTGGTGTATTACGTGCCAATCGTGGTTTTCATGGTGTTTGCTAAGTTTAACGGCAAGGTTGTGCCTAAGGAGTATTCGGATGGCGAATATGGCTGTGTTTGGAAGGAGGATTCTTGGGTGTCTGCTTATTTTGCACTGGCAATTCTCACTATGTTGTGGTCTGCTGCAGCTATGGTGGAAGCACAGGTTTATGTTATCAGTGGGACTATTGCTCGCTGGTACTTCTCCAAGGACTATGAAACTTCCACAAGGAGTATTAGAACTTCTCTCAGAAATGCTTTTGGTCCTTCTTCTGGCACGATATGTTTGTCGGGATTGCTCATATGTGTTGTTCGAGTAGTTCGTTCTGCGGTTGATAATGTGAGACAAGAAGCTGCTCCTGGCATTGTGAACATTATGTTACGGTGCTGTGTGAATGCCTTACTGACAGCGTTCGATTTTCTGAATAAGTTTACCTTAAACTTTGCTGCAATAACTGGTGAAGCTTATTGCTCATCTGCAAGGATGACATATGAACTTCTAAGACGTAACCTTCTCTCAGCTGCTTTTGTGGAGACCATCTCATCTCGCCTCCTGGCTGGAATTGTCTTTGTCCTCTCAGCAATCTACACAATTGTGGTGTGTGTTATCTTAAAATACGGGACCAATCTTGGGTCTGATTCATATTTTGTGGCTGCAATGGCATGGGTGCTACTCATAATAGTTCTGGGTTTCCTGGTGCATGTGCTAGATGATGTAATTGACACGGTTTATGTCTGCTATGCGATAGACAGGGACAGAGGAGAGGTTTGTAAACAAGACGTTCATGAGGTTTATGTTCACCTACCCATAAGTAGAAGTCTCAGACAATCCAATATTATTACAAGTACTCTAGGTGTGTAA 1680 0.4625 MVSSDDPNHKPDSSLYESSAAQPFLPKPHYPSSSSSPIEEHDSHESESNQQYLHISYNHGPRSFKDLPFLILFLLLVLSTFAFGIFSIFHRNTTYSSLSSYSYDSTTTSCTKNTTFSSSSASSPNWVSLNFYSSSSSPLVKDLIWTLVITFAFSVPMCWGLLLLLKHYTKQLVYVAIPFFIAIPIFLNVYWFVACTVSTSCSDAFPLAYRILVLVFIFLVIGVIVWILVVNWHRVELTVRIIGVASDALSRNLGLFGVLPCLTIGLVVYYVPIVVFMVFAKFNGKVVPKEYSDGEYGCVWKEDSWVSAYFALAILTMLWSAAAMVEAQVYVISGTIARWYFSKDYETSTRSIRTSLRNAFGPSSGTICLSGLLICVVRVVRSAVDNVRQEAAPGIVNIMLRCCVNALLTAFDFLNKFTLNFAAITGEAYCSSARMTYELLRRNLLSAAFVETISSRLLAGIVFVLSAIYTIVVCVILKYGTNLGSDSYFVAAMAWVLLIIVLGFLVHVLDDVIDTVYVCYAIDRDRGEVCKQDVHEVYVHLPISRSLRQSNIITSTLGV* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0388 559 Pfam Plasma-membrane choline transporter 216 525 IPR007603 GO:0022857|GO:0055085
Lja3g0388 559 MobiDBLite consensus disorder prediction 1 20 - -
Lja3g0388 559 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 52 539 IPR007603 GO:0022857|GO:0055085
Lja3g0388 559 MobiDBLite consensus disorder prediction 1 45 - -
Lja3g0388 559 PANTHER CTL-LIKE PROTEIN DDB_G0288717 52 539 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0388 - - gmx:100810591 778.474