Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0381 ATGGCTTCAGAAAAAGAGGTGGAACCAGTGATAGTTGGGAACTATGTAGAAATGGATATGGAAGGAAAACCAAAGGACATAAAATCCAAGCTATCAAACTTCTTGTGGCATGGTGGTTCTGTTTATGATGCTTGGTTTAGCTGTGCTTCCAACCAGGTGGCTCAAGTGCTGCTTACGTTGCCATACTCATTTTCCCAACTGGGAATGCTCTCTGGGATACTTTTTCAACTCTTCTATGGCTTGTTGGGTAGTTGGACAGCTTACCTCATTAGTGTTCTCTATGTTGAATACAGAACCAGGAAAGAGAGAGAAAAGGCTAATTTCAGGAACCATGTCATCCAGTGGTTTGAAGTTCTTGATGGGCTCCTTGGCAAGCACTGGAGAAACGTGGGTTTGGGCTTTAACTGCACATTTCTTCTGTTTGGATCTGTTATACAACTGATAGCTTGTGCAAGCAACATATATTACATAAATGACAATCTGGACAAGAGGACTTGGACTTACATCTTCGGAGCTTGTTGTGCCACCACTGTCTTTATTCCTTCCTTTCACAACTACAGAATCTGGTCCTTTTTAGGCCTTATCATGACCACCTACACTGCTTGGTATCTAGCTGTTGCATCTATCCTTCATGGACAGGTGGAAGGAGTGAAGCATTCGGGTCCGACCAAATTGGTTTTGTATTTTACAGGGGCCACAAACATTCTCTACACATTCGGAGGACATGCTGTTACTGTGGAGATAATGCACGCCATGTATAAGCCACAAAAGTTCAAAGCCATATATTTACTGGCGACCCTGTATGTGCTGACACTGACTCTTCCATCGGCTGCAGCAGTGTACTGGGCATTCGGAGACATGCTTCTAAATCACTCCAATGCTTTTGCTCTCCTCCCTCAATCACCCTTCAGAGACATGGCTGTCATCTTAATGCTCATTCACCAGTTTATAACATTTGGGTTTGCATGCACCCCATTGTACTTTGTGTGGGAGAAAATGGTGGGGATGCATGAGTGCAAGAGTCTGTGCAAGCGTGCTATAGTGAGATTGCCGGTGGTGATTCCGATATGGTTCTTGGCCATCATTTTCCCCTTTTTCGGACCCATCAACTCCACCGTTGGATCTCTCCTTGTCAGCTTCACAGTTTACATCATCCCTGCTCTGGCTCACATCTTCACCTTTAAATCATCCTCTGCTAGACAGAATGCGGTGGAACAACCTCCCAAGTTCGTTGGAAGATGGGTGGGAAGCTTTGTCATCAACGTGTTTATAGTGGTGTGGGTCCTCATTGTAGGCTTTGGATTTGGTGGGTGGGCCAGCATGGTCAACTTTATACACCAGATTGACACTTTTGGCCTCTTCACAAAATGTTACCAATGCCCTCCACCGTCATTTCCGCCTCTCAAGCAGCTGAACACCACCGCACCTTCGCCGCTTCACCACCACTGA 1449 0.4562 MASEKEVEPVIVGNYVEMDMEGKPKDIKSKLSNFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSWTAYLISVLYVEYRTRKEREKANFRNHVIQWFEVLDGLLGKHWRNVGLGFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLIMTTYTAWYLAVASILHGQVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMYKPQKFKAIYLLATLYVLTLTLPSAAAVYWAFGDMLLNHSNAFALLPQSPFRDMAVILMLIHQFITFGFACTPLYFVWEKMVGMHECKSLCKRAIVRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSSSARQNAVEQPPKFVGRWVGSFVINVFIVVWVLIVGFGFGGWASMVNFIHQIDTFGLFTKCYQCPPPSFPPLKQLNTTAPSPLHHH* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0381 482 Pfam Transmembrane amino acid transporter protein 37 430 IPR013057 -
Lja3g0381 482 PANTHER OS05G0424000 PROTEIN-RELATED 3 467 - -
Lja3g0381 482 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 2 3 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0381 Lja-Chr3 3880893 3885479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0381 4 460 Organic Solute Cotransporters AT2G21050 89.059 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0381 K13946 - gmx:100812002 933.324