Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0368 ATGGATCACGGGGTTGATGTTGTTGATGGCGGTGGTGAGGGAGAGAGCAAGAGAGTAGTGGTTGATGGGGTTTTTGATGATAGTGTTGTAGTGGGGTCTGATAAATCCAAGGATTTGGAAGGGGAGGAGGTTTTCCAGGAGGCGATGGAGCCGCAGGAGAGTTTCCGTGAACAGGGGGATGCTGTTGTTGATGAAAATGATGGTGTTGGAGCGGGTGGTGGTGCGGTGGGTTTGGATGTGGTGGGTGAGAATACTGATGCTGCTGCTGTTGCTGATGCTACGCAGGAGCATGATGACTTTGAGGAGGCAATTGGGGTTGTCGGTGAGCTTGGGAAAGAGGGGGAGGCCGAGGTAAATGGTGACCTGGGGCTGGGAAAGGATGGGCAGGGGGTTGGTGATAGTGTTCATCGGGATGGGGTTGATTCTGGAGGTACTGGAGATAGAGTGAATGATGAAGAGTTGGGCAGGGTGATAGAGGACTTTGAGGAGGCAATTGGGGTTGTCTGTGAGCCTTTGAAAGAGGGGGAGACTGAAGTAAATGCTGTCCAGGAGCTGGAAAAGGATGAGCAGGAGCTTGATGATAGTGTTCATCTGGATGGGGAGGAAGTATCTGGGTTAGATACTGATGGGGAGATGTTGGTTAAGGAGAATGGAGCTGTGGCGGATGGGAACTCCGGTTTGGTGAGTGAGAAAGCTGAATTTGATGATTCTGAATTCATGACCCCTAGAGAAAATGGTGCTATGTTCTTGGAAAATGGAAGCACAGACAAGGTGGACCATGTTGTTACTGAGTCTAATGCGGAATCTGAAACCAATGAGGTCGATGGAACCCAAGGCAATGAAGCTGGGGAGTTGAAGGAGGGTAGCTCAGATCCTGAATTTGAAGATAACAAGACAGAGGTGAAATTAAATGCTTCAGGTGTTCCTTCTAGTGAAATTGAAGAGGACTCAAATGAAGAAGTGCATGAAAATTCAGCTCATTTGAATTTAAAACATCAAGGTGAAGTAATTACAGAGACGAAGGATGATGCTCTTGGCACTAATATCATCCGCAAGGATAGAATTGGTGAAGATGACATGAAGGCTACTGAGTTAAGCGCCTATCAAGCTGGATCAGACACAGAGCATCAGAAAGTAATTGGTGAAATTAGTGGAGCTTCTCCACCTGAACTGCACGAAACTGTGCAGGAAAGTGGAAACTCTGCTGATGAGACGCTTTCTGTTCAGGCTAGTGCAGCTGATCAGAATGGTCAGACTACTGATATAAACAATGAGGATAGAAATGGAGAAGATGGCATTCAGACTACTGAAGTAAGAGCTTATGAGAACGGGGATGATCAAGCTGGATCAGGTGCTGAGCATCAGGAAGCAATTGGTGAAATTACTGGAGCTTCTGGACCTGAACTGCATGATACTGTGCACGAAAGTCCAAACTCTGCTGATGAGACACTTTCTGCTCATACTAGTGCAGCTGATCAGAGTGGTCAGACTACTGATATAAACCATGAGGATAGAAATGGTGAAGATGGCATTCAGACTACTAAAGTAAGAGCTTATTGTAAAGAGGATGATCAAGCTGGATCAGTCTCAGAGCATCAGGAAGCTATTGGTGAAATTACTGGAGATTCTCCACCTGAACTGCATCAAACTGTGCAGGAAAGTGGAAACTCTACTGATAAGACACTCTCTGTTCAGACTAGTGCAGCTGATCAGAATGTTCAGACTACTAATATAACCAATGAGGATAGAAATGGTGAAGATGGCATCAAGACTGCTGAAGTGAGAGCTTTTGCAAGTCAGAATGGTAAAGCTGAATCAGTCTCGGAGCATCCGGAAGCAATTGCTGAAATTAGAGGTGTTTCTCCCCCAAGCTCGTCTTCTGATGAAACACAGTCTGTTCGGGCTAGTGTAGCTGATCAAACGCCTGCAGCTCCATCTGAAAACTCTGCTGGTGCTGGCCCCCCTCCTGTTCGTCCAGCTGGCCTTGGCCGTGCAGCCCCCTTGCTGGAACCTGTAGTTCGGGTAGCGCAGCAGCCTCGTGTGAGTGGTACTGTATCAAGTACACAGTCCCAACAAATGGAAGATTCCCCAAATGGTGAAGCTGAGGAGTATGACGAGACACGTGAGCACCTTCAGATGATAAGGGTGAAGTTTTTACGGCTAGCTCATAGGCTTGGGCAAACACCCCATAATGTTGTTGTGGCCCAAGTTTTGTACAGACTTGGACTGGCTGAGCAACTCAGAGGAAGAAATGGGGGGCGTGTTGGTGCTTTTAGTTTTGATCGTGCAAGTGCAATGGCTGAGCAGCTTGAAGCAGCAGGTCAGGAGCCACTTGATTTCTCTTGTACCATAATGGTTCTTGGAAAGACTGGAGTTGGTAAAAGTGCTACCATCAATTCTATTTTTGATGAGGTGAAGTTCGATACTAGTGCTTTTAATATGGGAACCAAAAAGGTTCAGGATGTTGTGGGAACTGTGCAGGGCATTAAGGTTCGGGTCATTGATACTCCGGGGCTTCTACCTTCCTGGTCAGACCAACGAAGTAATGAGAAGATCCTGCTGTCAGTTAAGAACTTCATTAAGAAAACACCACCTGATATTGTGTTGTATCTTGATAGGTTAGATATGCAGAGCAGGGATTTTAGTGATATGCCACTTTTACGCACAATAACAGAAATTTTTGGGCCCTCCATATGGTTCAATGCCATTGTTGTTCTAACTCACGCAGCATCTGCTCCACCTGATGGCCCTAATGGTACTGCTTCCAGTTATGACACGTTTGTTACTCAGCGTTCTCATGTTGTGCAGCAAGCCATTCGTCAAGCAGCTGGTGACATGCGTCTCATGAATCCTGTGTCATTGGTTGAGAACCACTCTGCATGCAGAACAAATAGGGCTGGGCAGAGAGTTTTGCCAAATGGCCAGGTTTGGAAACCTCATTTGTTACTTCTATCTTTTGCCTCAAAAATTCTGGCAGAAGCAAATGCTCTTCTTAAGTTACAAGATAGTCCACCTGGGAAGCCTTATACAACTCGATCTAGAGCACCTCCATTACCTTTTCTTTTGTCAACCCTTCTCCAGTCAAGGCCACAATTGAAGTTGCCAGAGGAGCAGTTTGGTGATGAGGACAGTCCTGATGATGACCTCGATGAATCATCCGATTCTGATGATGAAACAGAACTTGATGAATTGCCACCATTTAAAGCTTTAACAAAAGCCCAAGTGGAAAAGCTGTCTAAAGCTCAGAAGAAAGCATATTTTGATGAGTTAGAGTATAGAGAAAAGCTTTTGATGAAGAAACAATTGAAGGAAGAAAGAAAGCGGCAGAAGATGATGAAAAAAATGGCCGAATCAGCTAAAGATCAACCTAGTGACTATAGTGAAAATGTGGAAGAAGAAAGTGGCGGTGCAGCATCTGTTCCTGTTCCCATGCCAGATTTGGCCTTGCCTGCTTCTTTTGATTCTGATAATCCCACTCATCGGTATCGTTATCTTGATTCATCAAACCAGTGGCTTGTAAGACCTGTTCTAGAAACTCACGGTTGGGATCATGATGTTGGTTATGAAGGTTTAAATGTGGAAAGATTGTTTGTTGTCCGCGAAAAGGTACCTCTATCTTTCAGTGGTCAGATTACCAAGGATAAAAAGGATGCTAATGTTCAGATGGAAGTAACCAGTTCCATTAAGCATGGGGAAGGGAAAGCAACCTCATTAGGTTTTGATATGCAGACTGTTGGAAAGGACTTAGCTTATACATTACGCAGTGAGACTAGATTTTGTAATTTTAGAAGAAATAAGGCGACTGCTGGTCTCTCGTTTACTGTCCTTGGTGATGCCTTATCAGCTGGAGCGAAGATTGAAGACAAATTGATTGCCAATAAGCGATTCAAGGTCGTCGTTAGTGGTGGTGCAATGGCAGGGCGTGGAGATGTTGCTTATGGTGGCAGTTTGGAGGCCCAGTTGAGAGATAAAGATTATCCTCTAGGACGTTCCTTATCAACGCTTGGACTTTCTGTTATGGATTGGCATGGAGATCTTGCTGTTGGGTGCAATGTGCAATCACAGATCCCAGTTGGAAGACATACAAACCTTATTGCCCGGGCCAATTTGAACAACAGAGGAGCAGGACAAATCAGTATTCGGTTAAATAGTTCGGAACAGCTTCAAATTGCTTTGGTTGGTCTTTATCCTCTGATAAGGAAGCTAATTAGTGATGCTCAACAATGGCAGTTTGGACAGTGA 4242 0.4517 MDHGVDVVDGGGEGESKRVVVDGVFDDSVVVGSDKSKDLEGEEVFQEAMEPQESFREQGDAVVDENDGVGAGGGAVGLDVVGENTDAAAVADATQEHDDFEEAIGVVGELGKEGEAEVNGDLGLGKDGQGVGDSVHRDGVDSGGTGDRVNDEELGRVIEDFEEAIGVVCEPLKEGETEVNAVQELEKDEQELDDSVHLDGEEVSGLDTDGEMLVKENGAVADGNSGLVSEKAEFDDSEFMTPRENGAMFLENGSTDKVDHVVTESNAESETNEVDGTQGNEAGELKEGSSDPEFEDNKTEVKLNASGVPSSEIEEDSNEEVHENSAHLNLKHQGEVITETKDDALGTNIIRKDRIGEDDMKATELSAYQAGSDTEHQKVIGEISGASPPELHETVQESGNSADETLSVQASAADQNGQTTDINNEDRNGEDGIQTTEVRAYENGDDQAGSGAEHQEAIGEITGASGPELHDTVHESPNSADETLSAHTSAADQSGQTTDINHEDRNGEDGIQTTKVRAYCKEDDQAGSVSEHQEAIGEITGDSPPELHQTVQESGNSTDKTLSVQTSAADQNVQTTNITNEDRNGEDGIKTAEVRAFASQNGKAESVSEHPEAIAEIRGVSPPSSSSDETQSVRASVADQTPAAPSENSAGAGPPPVRPAGLGRAAPLLEPVVRVAQQPRVSGTVSSTQSQQMEDSPNGEAEEYDETREHLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFDRASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFDTSAFNMGTKKVQDVVGTVQGIKVRVIDTPGLLPSWSDQRSNEKILLSVKNFIKKTPPDIVLYLDRLDMQSRDFSDMPLLRTITEIFGPSIWFNAIVVLTHAASAPPDGPNGTASSYDTFVTQRSHVVQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDSPPGKPYTTRSRAPPLPFLLSTLLQSRPQLKLPEEQFGDEDSPDDDLDESSDSDDETELDELPPFKALTKAQVEKLSKAQKKAYFDELEYREKLLMKKQLKEERKRQKMMKKMAESAKDQPSDYSENVEEESGGAASVPVPMPDLALPASFDSDNPTHRYRYLDSSNQWLVRPVLETHGWDHDVGYEGLNVERLFVVREKVPLSFSGQITKDKKDANVQMEVTSSIKHGEGKATSLGFDMQTVGKDLAYTLRSETRFCNFRRNKATAGLSFTVLGDALSAGAKIEDKLIANKRFKVVVSGGAMAGRGDVAYGGSLEAQLRDKDYPLGRSLSTLGLSVMDWHGDLAVGCNVQSQIPVGRHTNLIARANLNNRGAGQISIRLNSSEQLQIALVGLYPLIRKLISDAQQWQFGQ* 1414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0368 1413 MobiDBLite consensus disorder prediction 679 697 - -
Lja3g0368 1413 MobiDBLite consensus disorder prediction 1036 1068 - -
Lja3g0368 1413 ProSiteProfiles AIG1-type G domain profile. 779 1008 IPR006703 GO:0005525
Lja3g0368 1413 MobiDBLite consensus disorder prediction 122 150 - -
Lja3g0368 1413 MobiDBLite consensus disorder prediction 32 59 - -
Lja3g0368 1413 MobiDBLite consensus disorder prediction 368 663 - -
Lja3g0368 1413 MobiDBLite consensus disorder prediction 545 582 - -
Lja3g0368 1413 MobiDBLite consensus disorder prediction 1040 1061 - -
Lja3g0368 1413 MobiDBLite consensus disorder prediction 620 647 - -
Lja3g0368 1413 TIGRFAM 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains 658 1405 IPR005690 GO:0003924|GO:0005525|GO:0009707|GO:0045036
Lja3g0368 1413 MobiDBLite consensus disorder prediction 286 300 - -
Lja3g0368 1413 MobiDBLite consensus disorder prediction 1104 1141 - -
Lja3g0368 1413 MobiDBLite consensus disorder prediction 498 529 - -
Lja3g0368 1413 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 775 916 IPR027417 -
Lja3g0368 1413 Pfam Translocase of chloroplast 159/132, membrane anchor domain 1140 1403 IPR024283 -
Lja3g0368 1413 MobiDBLite consensus disorder prediction 1104 1127 - -
Lja3g0368 1413 MobiDBLite consensus disorder prediction 478 497 - -
Lja3g0368 1413 MobiDBLite consensus disorder prediction 391 423 - -
Lja3g0368 1413 MobiDBLite consensus disorder prediction 679 704 - -
Lja3g0368 1413 Coils Coil 1099 1122 - -
Lja3g0368 1413 MobiDBLite consensus disorder prediction 264 325 - -
Lja3g0368 1413 Gene3D - 751 999 IPR027417 -
Lja3g0368 1413 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 549 1405 IPR045058 -
Lja3g0368 1413 Pfam AIG1 family 782 940 IPR006703 GO:0005525
Lja3g0368 1413 PANTHER TRANSLOCASE OF CHLOROPLAST 120, CHLOROPLASTIC-LIKE 549 1405 - -
Lja3g0368 1413 CDD Toc34_like 754 999 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0368 Lja-Chr3 3750658 3755617 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0368 - - gmx:100776898 1590.86