Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0359 ATGATCGACTCAAATCCACCACTCTTGCACCAGTATGGAGCACTTGTGCGAAAATCTGCTGAACCCCAAAAGGCTAAAAAATTTAGTCATCAAAAGCATCCTGTAGTGGATGCATGTAGTCTGCCATTGATAGACCTTAATGGTCTTAAAAGTTCAAATGAAGGAGAAAGACTGGCTTGCACAGTAGCAATATGCAAGGCAGCATCAGAATGGGGTTTTTTCCAAGTCATAAACCATGGGATAAACCTTGAGCTACTAAGAAACATGAGGGAAGAGCAAATGAAGTTGTTTGAAGTGCCCTTTGAGAGGAAGGTCACTAGTGGGCTTCTAAATAACCCCTACAGTTGGGGGACACCAACAGCTACAAGTGCAAATCACTTCTCATGGTCAGAATCTTTCCACATTCCTCTCACCATGATTTCAGAAGCAGCTTCCTGGGGGGAATTCAATTCTTTAAGGGAAGCAATAAATGAGTTTGCACCAGCTATGTTAGAAGTATCTAGGCTATTGGCAAGCATTCTCGTGGAGAACATGGGCCACCCATCTGATGCAATTGAAAAGCTCTGTGATGCTAGCACATGCTTTCTGAGATTAAATCACTACCCATGCTGCCCAAAATCTAAAGAAGAAATTTTTGGATTAGTGCCTCACACTGACAGTGATTTCCTTACAATCCTGTATCAAGACCAAGTCGGTGGACTCCAACTCATGAAAGATTCTAAATGGGTTGCTGTAAAACCAAATCCAGATGCTCTGATTGTTAACATTGGAGACCTTTTCCAGGCCTGGAGTAATAATGAGTACAAAAGTGTGGAGCACAAGGTGGTGGCAAATGACAAAGTGGAAAGATACTCCATTGCTTACTTCCTGTGCCCTTCTTACAGTACTATGATAAGTGGTTGCAGAGAACCTTCTGTGTATAGAAAGTTCACATTTGGAGAATACCGGCATCAAAATAAAGAGGATGTCAAGAAAATAGGACACAAGATTGGACTTCCAAGATTTCTAGTTTAA 1014 0.4162 MIDSNPPLLHQYGALVRKSAEPQKAKKFSHQKHPVVDACSLPLIDLNGLKSSNEGERLACTVAICKAASEWGFFQVINHGINLELLRNMREEQMKLFEVPFERKVTSGLLNNPYSWGTPTATSANHFSWSESFHIPLTMISEAASWGEFNSLREAINEFAPAMLEVSRLLASILVENMGHPSDAIEKLCDASTCFLRLNHYPCCPKSKEEIFGLVPHTDSDFLTILYQDQVGGLQLMKDSKWVAVKPNPDALIVNIGDLFQAWSNNEYKSVEHKVVANDKVERYSIAYFLCPSYSTMISGCREPSVYRKFTFGEYRHQNKEDVKKIGHKIGLPRFLV* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0359 337 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 190 292 IPR005123 -
Lja3g0359 337 Gene3D - 12 325 IPR027443 -
Lja3g0359 337 Pfam 2OG-Fe(II) oxygenase superfamily 195 292 IPR044861 -
Lja3g0359 337 Pfam non-haem dioxygenase in morphine synthesis N-terminal 41 135 IPR026992 -
Lja3g0359 337 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 26 329 - -
Lja3g0359 337 PANTHER OS02G0630300 PROTEIN 26 329 - -
Lja3g0359 337 SUPERFAMILY Clavaminate synthase-like 34 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0359 Lja-Chr3 3677290 3680133 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0359 16 315 Glycosyltransferase AT5G59530 29.747 2.33e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0359 - K04125 gmx:100819653 598.201