Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0347 ATGCTACCACACACTCTTTCCCGCCACATACACCCACCATTGCAATTGCAAACGCCAGAAATGGCTTCTTCCAAAACCCTACTCGACATGTTCCAACCCGCTTCCAAGCGCATGAAACCCACCCTCACCACCGCCACCACCACCACCACCACCGCATGCAAATCCGACAACGCCGCTAATGGCTCCTCACTTTCCATTGACCAAAAATCGCGCATCGAACACAACAAACTCCTCGCCAAATCCAAGCGGAACCTCAAAATCTGCCTCGAAAGAGTCTCCAAATTCAAAGCCTCAGGTGGTAGCGGTTTTGTGAAATTGGAGGAGTTGCTGGTGGAGGAATCGTGGTTGGAAGCTCTTCCCGGCGAACTCCAGAAACCCTACGCTGTCAATCTTTCCAAATTCGTTGAAACGGAGATTTGCGGTGGCGATGTGTACCCTCCGCCGCACTTGATCTTCAACGCCCTTAACTCCACCCCTTTTCATCATGTCAAGGCTGTGATTCTCGGCCAGGACCCTTATCATGGACCTGGTCAAGCAATGGGTCTTTCATTCTCAGTCCCTGAGGGAGTCAAAGTTCCTTCCAGTTTGGTGAATATATTCAAGGAGCTTCACAAAGACGTTGGCTGCTCCGTTCCGTCTCATGGTAATCTGGAAAAATGGGCTGTGCAGGGTGTTCTCTTACTCAATGCTGTTCTCACAGTCAAGAAGCATCAAGCAAATTCTCATGCGAAAAAAGGCTGGGAACATTTTACGGATGCTGTTATCAAGACAATCTCACAGAAGAATGAAGGGGTTGTGTTTCTGTTGTGGGGAAACTCTGCTCGCGCGAAATCTAGGTTAATCGATGCAACAAAGCATCACATTCTAGAAGCTGCACATCCTTCTGGTTTGTCTGCAAATAGGGGCTTCTTTGGCTGCAGGCACTTCTCCCGCACTAACCAACTTCTGGAGAAAATGGGGACTGGTCCTATAGATTGGCAACTATAA 987 0.4894 MLPHTLSRHIHPPLQLQTPEMASSKTLLDMFQPASKRMKPTLTTATTTTTTACKSDNAANGSSLSIDQKSRIEHNKLLAKSKRNLKICLERVSKFKASGGSGFVKLEELLVEESWLEALPGELQKPYAVNLSKFVETEICGGDVYPPPHLIFNALNSTPFHHVKAVILGQDPYHGPGQAMGLSFSVPEGVKVPSSLVNIFKELHKDVGCSVPSHGNLEKWAVQGVLLLNAVLTVKKHQANSHAKKGWEHFTDAVIKTISQKNEGVVFLLWGNSARAKSRLIDATKHHILEAAHPSGLSANRGFFGCRHFSRTNQLLEKMGTGPIDWQL* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0347 328 SMART UDG_2 156 316 IPR005122 -
Lja3g0347 328 SMART UDG_2_a 156 316 - -
Lja3g0347 328 Pfam Uracil DNA glycosylase superfamily 159 315 IPR005122 -
Lja3g0347 328 Hamap Uracil-DNA glycosylase [ung]. 112 327 IPR002043 GO:0004844|GO:0006281|GO:0006284
Lja3g0347 328 SUPERFAMILY Uracil-DNA glycosylase-like 110 328 IPR036895 -
Lja3g0347 328 TIGRFAM ung: uracil-DNA glycosylase 113 320 IPR002043 GO:0004844|GO:0006281|GO:0006284
Lja3g0347 328 Gene3D - 93 328 IPR036895 -
Lja3g0347 328 ProSitePatterns Uracil-DNA glycosylase signature. 164 173 IPR018085 GO:0006281|GO:0016799
Lja3g0347 328 PANTHER URACIL-DNA GLYCOSYLASE 21 328 IPR002043 GO:0004844|GO:0006281|GO:0006284
Lja3g0347 328 CDD UDG-F1-like 127 326 IPR002043 GO:0004844|GO:0006281|GO:0006284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0347 K03648 - gmx:100818241 494.197