Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0345 ATGATTCTTCAACAATCTTCTTCCACCTTCCACTTCCAATTCTCTCACATTTTCTGCCCCTGCAACAACACCACCATCACTCATGAAGTAGTGAACGCTTTCGCCGCATTCCCAATCTCCAGAAGGAGAAGAAACCGCTTCATTTCAATTTCAAATTCTGGGTATCGCAGCAAATTCCGAAGAAAACCAACCCTCACCTTCTGTGCCCTTTCCAACCGGAATTTGAACGCCGAATTCGCGAGAAGGGTCGTTCTGAACCGGATTCCCAATGAATTTGAAGGTGAACGCGGTGATGATACCAGCGAGGAGTTGCAGGAATCGCCAGTTCAATTGGGTTCCAATTTCACTACTAGATTCCAAGAAGACCCGCTTGTGGATAAGCTCAGAACTCAATTGGGGGTGATTCACCCGATTCCATCGCCTCCGATTAACCGCAACGTGGTTGGTTTGTTTGTGTTCTTTTTCTTTGTTGGGGTTGTGTTTGATAAGCTCTGGACTTCAAGGAGGAACAAGGTTAACAGTGAGGATAGTTTGCGTGGTGTGTGGCCTCAGGTGCCTACTAGCTTCTCTTTGTTTTTGGAGAAGGATTTGCAGAGGAAGGAGTCTGTGGAATGGGTCAACATGGTGCTGGGGAAGCTCTGGAAGGTTTATAGAGGTGGGCTTGAGAATTGGATCATTGGGTTGCTTCAGCCTGTTATTGATGACTTGAAGAAGCCTGATTATGTGGAGAGGGTTGAGATTAAGCAATTCTCATTGGGGGATGAACCCTTGTCTGTTAGGAATGTCGAGCGCAGGACTTCTCGCCGGGTGAATGATTTGCAGTACCAGATAGGCCTTAGGTATACTGGTGGTGCTCGTATGCTGTTAATGCTTTCTCTGAAATTTGGCATTATTCCAATTGTTGTGCCTGTTGGTGTTCGAGATTTTGACATTGATGGAGAACTTTGGGTGAAATTACGACTAATACCAACAGCACCTTGGGTTGGAGCTGCTTCATGGGCTTTTGTTTCCCTTCCAAAGATCAAGTTTGAACTGTCTCCATTCCGTTTATTTAATCTAATGGCAATTCCAGTACTCTCGATGTTTTTGACCAAACTTCTCACAGTAGACTTGCCTAAACTATTTGTGCGGCCAAATAAAATTGTTTTGGATTTCCAGAAGGGAAAAGCTGTTGGTCCTGTTCCTAATATTATTAAATCTGGAGAAATGCCTGAAGGAAGCAAGGATTGTGTCGGTGAACTATCTGTTACTCTTGTTGATGCTCGAAAGCTTCCTTATCTCTTCTATGGCAAGACAGATCCTTATGTCATTCTTAGCCTTGGAGATCAAATTATACGCAGTAAAAAGAACAGTCAAACTACTGTCATTGGGCCCCCTGGAATGCCAATTTGGAATCAGGATTTTCATATGCTTGTTAGCAACCCTAGAAAGCAGAAGTTGAGTATCCAAGTAAAGGACGCACTGGGATTTGCAGACTTGACTATTGGTACGGGAGAGGTTGATTTGGGATCTCTTAAAGACACTGTACCAACAGATAGAATTGTAGTTTTACAAGGAGGTTGGGGTTTTTTAGGAAAGGGCTCCTCTGGGGAGATATTACTCCGGCTAACATATAAAGCATACGTGGAGGATGAGGAAGATGACAAGACTGAGTTGGATTCCATTGATCTTGATGTGTCAGATGACGAGTTGTCTGATTCAGAAGAAGAAAGTCTCAGTAATAAGAAGGGTGTTAGGGACCCTACATACGAAGCAGACAAAGAATCATTTATGGATGTTTTGGCAGCATTGATTGTTAGTGAAGAATTCCAAGGGATAGTAGCATCTGAAGCAGGGTTTACCAAAGCTGTGGATAATGGCTCAAATATAGGGTCCAAACTCTCCAACGTATCAAATTCTCCTGTTGTGAATGCTGAACCAATTCCTTCCAGTTCTGATAATTCCAAAGGGTCAGCCTTAATATGGCTTGCTGTGATTACTGGCATAGCATTACTAATAGCTGTCAACATTGGGGGTTCAAATCTCTTCAATCCATAG 2037 0.4335 MILQQSSSTFHFQFSHIFCPCNNTTITHEVVNAFAAFPISRRRRNRFISISNSGYRSKFRRKPTLTFCALSNRNLNAEFARRVVLNRIPNEFEGERGDDTSEELQESPVQLGSNFTTRFQEDPLVDKLRTQLGVIHPIPSPPINRNVVGLFVFFFFVGVVFDKLWTSRRNKVNSEDSLRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGLENWIIGLLQPVIDDLKKPDYVERVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLMLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTAPWVGAASWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTVDLPKLFVRPNKIVLDFQKGKAVGPVPNIIKSGEMPEGSKDCVGELSVTLVDARKLPYLFYGKTDPYVILSLGDQIIRSKKNSQTTVIGPPGMPIWNQDFHMLVSNPRKQKLSIQVKDALGFADLTIGTGEVDLGSLKDTVPTDRIVVLQGGWGFLGKGSSGEILLRLTYKAYVEDEEDDKTELDSIDLDVSDDELSDSEEESLSNKKGVRDPTYEADKESFMDVLAALIVSEEFQGIVASEAGFTKAVDNGSNIGSKLSNVSNSPVVNAEPIPSSSDNSKGSALIWLAVITGIALLIAVNIGGSNLFNP* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0345 678 MobiDBLite consensus disorder prediction 550 568 - -
Lja3g0345 678 CDD C2 414 508 - -
Lja3g0345 678 SMART C2_3c 413 514 IPR000008 -
Lja3g0345 678 ProSiteProfiles C2 domain profile. 393 515 IPR000008 -
Lja3g0345 678 MobiDBLite consensus disorder prediction 550 580 - -
Lja3g0345 678 Gene3D C2 domain 402 541 IPR035892 -
Lja3g0345 678 Pfam C2 domain 412 508 IPR000008 -
Lja3g0345 678 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 199 386 IPR031468 GO:0008289
Lja3g0345 678 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 9 678 - -
Lja3g0345 678 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 412 540 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0345 Lja-Chr3 3566989 3574050 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0345 412 549 Acyl Lipid Metabolism Gene Families AT4G13550 30.714 1.78e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0345 - - gmx:100806668 959.903