Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0318 ATGGCGACTCTGCAATTCACCTTCACTGACCCAACCACGTTATGGAGGCCATCTCTCCCTTCTTCTTCTAGAACTTCCCATTCTCGCAACCGCACCAGCTTCGTCGTCAAAGCTTCTTTCGACATTTCCAGAACCAGGAGACAGCTCCTCGCCGACACCGCAGCATTATCTCTGCTACTCCCTTCTCTGCCGGCGAGGTCCGACGAGGCGCTCGCTGAGTGGGAGAGAGTTTACCTCCCTATCGACCCTGGCGTCGTGCTTCTCGACATTGCTTTCGTCCCTGAGGATCCCAACCATGGTTTTCTTCTGGGTACGAGGCAAACCCTTTTGGAGACTAAAGATGGAGGAAACACTTGGGGTCCACGATCTATACCCTCTGCAGAGGATGAAGATTTCAACTACAGGTTTAATTCCATCAGCTTCAGAGGGAAGGAAGGGTGGATAGTGGGGAAACCTAATATTCTGCTCTACACTTCTGATGCTGGAGAAAGTTGGGGAAGGATACCACTCAGTGCTCAACTTCCTGGTGATATGGTGTACATAAAGGCAACTGGGGATAAGAGTGCAGAGATGGTGACTGACGAAGGTGCAATCTATGTTACATCAAATAGAGGCTACAACTGGAAGGCTGCTGTTCAGGAAACGGTGTCAGCTACTCTCAACAGAACAGTTTCTAGTGGCATTAGCGGTGCAAGCTATTACACTGGAACTTTCAATACTGTCAATCGCTCTCCAGATGGAAATTATGTCGCTGTATCAAGTCGTGGTAACTTCTACTTAACCTGGGAGCCTGGTCAGGCATACTGGCAGCCACATAACAGAGCAGTTGCCAGAAGAATTCAGAACATGGGATGGAGAGCTGATGGTGGTCTGTGGCTTCTTGTTCGCGGAGGTGGTCTTTATCTAAGCAAAGGCACAGGGATAACTGAAGAATTTGAGGAGGTGCCTGTTCAAAGCCGGGGCTTTGGCATTCTTGATGTGGGGTATCGTTCAACGGACGAGGCTTGGGCAGCAGGAGGAAGTGGTGTTCTGTTGAGAACTAATAATGGTGGCAAGTCATGGGTTCGTGACAAAGCTGCTGACAACATTGCTGCAAATTTATACTCTGTGAAGTTCATTGATGACAAGAAGGGATTTGTATTGGGGAATGATGGAGTCTTGCTTCGCTACCTTGGATAG 1179 0.4894 MATLQFTFTDPTTLWRPSLPSSSRTSHSRNRTSFVVKASFDISRTRRQLLADTAALSLLLPSLPARSDEALAEWERVYLPIDPGVVLLDIAFVPEDPNHGFLLGTRQTLLETKDGGNTWGPRSIPSAEDEDFNYRFNSISFRGKEGWIVGKPNILLYTSDAGESWGRIPLSAQLPGDMVYIKATGDKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQAYWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGITEEFEEVPVQSRGFGILDVGYRSTDEAWAAGGSGVLLRTNNGGKSWVRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0318 392 SUPERFAMILY Oligoxyloglucan reducing end-specific cellobiohydrolase 74 391 - -
Lja3g0318 392 PIRSF Photosystem_II_Ycf48-like 38 392 IPR016705 -
Lja3g0318 392 Pfam Photosynthesis system II assembly factor YCF48 70 390 IPR028203 -
Lja3g0318 392 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 43 392 - -
Lja3g0318 392 Gene3D - 124 364 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0318 - - gmx:100810566 676.396