Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0294 ATGGTTCCACCGGCGGTTCAATCGCCGGACCCACAAGCCACACAGCAGTTCCTCAGCTCCGTCCTCTCCCAACGCGGTCCCTCCGCCGTCCCCTACTCGGAGGACACAAAGTGGCTCATCCGCCAACACCTCGTTGCTCTCACCGCCGCCTTCCCTTCCCTGGAACCCAAAACCGCCACCTTCACCCACAACGACGGCCGCTCCGTCAACCTCCTCCAAGCCGTCGGAACCATCCCTATGACCTACCAATCCGTCACCTACAACATCCCCGTCGTCATCTGGCTCATGGAGTCTTACCCTCGCCACCCACCTTGCGTCTACGTTAACCCCACCAGAGACATGATCATCAAACGCCCCCACGCTCATGTTAACCCTTCTGGGTTGGTTTCCGTTCCCTATCTGCATAATTGGATCTACCCTAGTTCCAATTTGGTTGATCTCGTTCTCTCTACCAGTCATCTCTTTGCTCGTGACCCACCCCTCTATTCCCAACGTAGACCTAACCCTAATCCCAATCCGAATTTCGCTACTTCTGCATCGAATTTGTCGAATTCGTCATCTGGGTATCATAACCACCCCCACCACCCTCCTCCTCAGAGGCCGTATCCTCCTTCGCCTTATGGTTCAGTGGGTTCTCCTGCTAGGGTTTCTTCCCAGACTGAGGACCCCAGTGAGGTTTTCAAGCGGAATGCGATCAATAAGCTTGTGGAGACGGTGCATAACGATGTTACCGCGTTGAGGAAGACGAGGGAGAGTGAGATGGAGGGGCTGTTTAGTTTGCAGGGGGTGTTGAAGCAGAGGGAGGATCATCTCAATAGGGGTGTGAGGGAGATGCAGGGGGAGATTGAAGGGTTGGAGCAGCAGCTTCAGATGGTTTTGATGAATACTGATATTTTAGAGGGGTGGTTGAGAGAGAATCAAGGGAAGAAGTTGGGGGGTTTGGAGAATGCTGAGGAGGCTTTTGACTGTATGGATGTGCTATCAAAGCAGATGCTTGATTGCACTGCTTCGGATTTGGCTGTCGAAGATACTCTCTATGCATTGGATAAGGCAGTTCAGGTTGGGGCTGTACCGTTTGATCAGTACTTGAGGAGTGTGAGGGCACTGTCGAGGGAGCAATTCTTTCAACGAGCTACTGCTGCAAAAGTTAAAGCTGCTCAGATGCAGGCTCAGGTTTCTAATATGGCTGCTCGGATCCAACATTATGCTAGCTGA 1215 0.5259 MVPPAVQSPDPQATQQFLSSVLSQRGPSAVPYSEDTKWLIRQHLVALTAAFPSLEPKTATFTHNDGRSVNLLQAVGTIPMTYQSVTYNIPVVIWLMESYPRHPPCVYVNPTRDMIIKRPHAHVNPSGLVSVPYLHNWIYPSSNLVDLVLSTSHLFARDPPLYSQRRPNPNPNPNFATSASNLSNSSSGYHNHPHHPPPQRPYPPSPYGSVGSPARVSSQTEDPSEVFKRNAINKLVETVHNDVTALRKTRESEMEGLFSLQGVLKQREDHLNRGVREMQGEIEGLEQQLQMVLMNTDILEGWLRENQGKKLGGLENAEEAFDCMDVLSKQMLDCTASDLAVEDTLYALDKAVQVGAVPFDQYLRSVRALSREQFFQRATAAKVKAAQMQAQVSNMAARIQHYAS* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0294 404 MobiDBLite consensus disorder prediction 160 225 - -
Lja3g0294 404 MobiDBLite consensus disorder prediction 194 208 - -
Lja3g0294 404 SUPERFAMILY Endosomal sorting complex assembly domain 325 385 IPR037202 -
Lja3g0294 404 ProSiteProfiles UEV domain profile. 21 165 IPR008883 GO:0015031|GO:0036211
Lja3g0294 404 Gene3D Ubiquitin Conjugating Enzyme 6 162 IPR016135 -
Lja3g0294 404 ProSiteProfiles Steadiness box (SB) domain profile. 325 393 IPR017916 -
Lja3g0294 404 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 4 403 - -
Lja3g0294 404 Pfam UEV domain 41 161 IPR008883 GO:0015031|GO:0036211
Lja3g0294 404 SUPERFAMILY UBC-like 24 161 IPR016135 -
Lja3g0294 404 MobiDBLite consensus disorder prediction 168 192 - -
Lja3g0294 404 MobiDBLite consensus disorder prediction 211 225 - -
Lja3g0294 404 Gene3D - 324 386 - -
Lja3g0294 404 Pfam Vps23 core domain 319 382 IPR017916 -
Lja3g0294 404 PANTHER PROTEIN ELC-LIKE 4 403 - -
Lja3g0294 404 Coils Coil 268 295 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0294 K12183 - gmx:100798165 569.696