Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0290 ATGGAACTGACATGGTTGAGTGCCATTTTGGTTGGTGCTGCTTTTGGTTACTTCATTGGTTCTCAGTATCCCCATCGTTTTCTCTTCCCACATAGAAGATCATTGTCTTCCAAAGACAAAGAACCTTCACTTCTCAACGATGACAGTAACAGTAGTAGCAAGAACAAGAAGAAGAAGAACAGTAGTAACTCCAAACTCAAAGACCCACTTGAGGTTGAACAGCTCGCTGACATTCTCGATGATTTCAAGATGATACTTGTTGTTAGAAATGATCTCAAAATGGGTAAAGGAAAGATTGCTGCTCAATGCAGTCATGCAACATTGGGTCTCTATAAAAAGCTCCTTCATCGTGCCCCAAAGGCTTTGAACAGGTGGGAGATGTCTGCACAGCCGAAGGTTGTTGTCAAAATTGAAAGTGAAGAAGATATGCTGGCTTTGCAGGAAAGGGCTAAATCTCTGAAGTTACCCACCCATATCACAATCGATGCTGGGAGAACACAGATTGCACCGAATTCCAGAACAGTGATGGCAATTCTCGGACCTGTTGAAGTTGTGGATGAGGTAACAGGTGGACTGAAACTATTATAG 588 0.4269 MELTWLSAILVGAAFGYFIGSQYPHRFLFPHRRSLSSKDKEPSLLNDDSNSSSKNKKKKNSSNSKLKDPLEVEQLADILDDFKMILVVRNDLKMGKGKIAAQCSHATLGLYKKLLHRAPKALNRWEMSAQPKVVVKIESEEDMLALQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDEVTGGLKLL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0290 195 MobiDBLite consensus disorder prediction 37 55 - -
Lja3g0290 195 Gene3D Bit1 80 195 IPR023476 -
Lja3g0290 195 MobiDBLite consensus disorder prediction 37 66 - -
Lja3g0290 195 TIGRFAM arch_pth2: peptidyl-tRNA hydrolase 83 195 IPR002833 GO:0004045
Lja3g0290 195 Pfam Peptidyl-tRNA hydrolase PTH2 82 195 IPR002833 GO:0004045
Lja3g0290 195 SUPERFAMILY Peptidyl-tRNA hydrolase II 80 195 IPR023476 -
Lja3g0290 195 PANTHER OSJNBA0060D06.11 PROTEIN 3 195 - -
Lja3g0290 195 CDD PTH2 82 195 IPR002833 GO:0004045
Lja3g0290 195 PANTHER PEPTIDYL-TRNA HYDROLASE 2 3 195 IPR002833 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0290 Lja-Chr3 2992821 2996158 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0290 K04794 - gmx:102664938 292.737