Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0287 ATGGGACCGTTCAAAGAATTATCTCAGTATCTTCTTGAAGCAAATTTTTTGGGAACCTATCAACGGCAGTTCAATGAAGATTTTTTTGCAAAGAACGTGTACTTGTTTGACCTTGTACAGTTGCGAGCGGATTTGAGATTAAATATGTGGGATTGTTCTGATTGGAGAACATCCAAGGAGATAGCAGAAACTATTCTGCGTTTCCTGCAGGATGCAAACTCAGTTATGTTGCTTTCAAGTTCAAAGCTTTCTGCACTAAAAGGACTTACAGCAGTGTTGGCCGTCTACCATGATGATTCACTAGGGAGGGCAGCAACAGGAGAGCGGATGCCGGATGAACTCATGATCACTTGCATAGATATTACATCCCAATCTTTCCTTGCTACCATTGAGACATTATCATCTGCTCTAGATGCCTCTCAGGATATGCTAAATTTTCTTGCATGTCAGAATCAAGCTTCTGTCATTGTTGCTGAGCTCTGTCAAGCCAATAAACTGAGGGAATCCCCAGAAACACAGAATGTTTGCAAGTTACTGTTGCAAATACTTGAAATGGCCTTGTACTTGGAACTTTGTGTTCTACAAATTTGTGGCATAAGACCTGTATTAGGACGTGTGGAGGACTTTTCGAAGGGAGCCAAATCTTTATATAGTGGTAAGCTTAACCCTTTGGTAGCACCTCATTGGAGGGTCATGCTTTTCTAA 705 0.4128 MGPFKELSQYLLEANFLGTYQRQFNEDFFAKNVYLFDLVQLRADLRLNMWDCSDWRTSKEIAETILRFLQDANSVMLLSSSKLSALKGLTAVLAVYHDDSLGRAATGERMPDELMITCIDITSQSFLATIETLSSALDASQDMLNFLACQNQASVIVAELCQANKLRESPETQNVCKLLLQILEMALYLELCVLQICGIRPVLGRVEDFSKGAKSLYSGKLNPLVAPHWRVMLF* 235
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0287 234 PANTHER NUCLEOPORIN NUP188 HOMOLOG 147 219 IPR044840 GO:0017056
Lja3g0287 234 PANTHER NUCLEOPORIN NUP188 HOMOLOG 6 150 IPR044840 GO:0017056
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lja3g0287 Lja-Chr3 2982594 2985212 Tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0287 K14311 - gmx:100796560 216.853