Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0273 ATGGGGAGTGTTTCGTCTGAGGAAGGTTCTGACCGATGTGGGAGCTACAGCTTGAGCGCTGACGTCAGCGAATCCGAGAGCTGTAGCAGCTTCCGCCGTTTCGACGCCGAGGGGGCTTCCAGCTCCGCCAACCTCTCTCCGCCTCCGCTTGCCGCCTCTCACTTCAACTTCCCGCCGCCGCAGGTGATGTTGCCGGTCATCGGTGGCAAGGATGTCGTCGTTTGGGATCACAAGCGTGACCTTGACTTGTCAGAAGTGGAGATGATGAAGGAGAGGTTCGCTAAGCTGCTTCTAGGGGAAGACATGTCTGGTGGGGGAAAAGGGGTCTGCACTGCGCTTGCTATCTCGAATGCAATCACCAACCTCTCTGCAACTGTGTTTGGCGAGCTATGGAGGTTGGAGCCACTGGCACCGCAGAAGAAAGCCATGTGGAGAAGGGAAATGGAATGGCTTTTATGTGTAAGTGACTCAATTGTGGAGCTTGTGCCGTCGGTGCAGCAGTTTCCTGGGGGTGGAACCTATGAAGTGATGGCTACGCGTCCTCGTTCTGATTTGTACATCAATCTCCCGGCTTTGAAGAAGCTTGATGGGATGCTGCTTAGCATGCTGGAGGGTTTTCATGATACTCAGTTTTGGTATGTTGATAGGGGGATTATATTGGGCGATTCCAAGGATTGTGATGAGTATGGTAGACCTTCGGTTCGGCAAGAGGAGAAATGGTGGCTTCCATCTCCTAAGCTTCCACCAAACGGCTTGTGCGAGGATGATAGGAAGAAGTTGCAGCAGTGCAGGGATTGCACCAACCAGATACTGAAGGCTGCCATGGCAATCAATAGTTCTGTTCTTGCTGAAATGGAGATTCCTGGTGCCTATGTAGAATCGTTGCCAAAGAATGGGAAAGCTTGTCTAGGGGATATAATCTATCGGTACATAAGTGCTGACCAGTTCTCATCAGAATGTCTCCTTGATTGCCTGGATCTTTCATCAGAGCACCACACTCTGGACATAGTTAATAGAATTGAGGCTGCTGTGAATGTATGGAGACTGAAGGACCATAAGAAACATCTAAGTTCTGTGAAAGCCAGACGGTCTTGGAGTGGGAAGGTTAAGGGCCTTGTTGCTGATGGGGAAAAGCACCATTTTCTTTCCCAAAGGGCAGAGACACTTCTACAAAGCTTGAAACACCGATTTCCAGGACTCCCTCAAACAGCACTAGATATGGCCAAGATACAATACAATAAGGATGTAGGGCAGGCTATTCTTGAAAGTTATTCAAGGGTGATGGAGAGCTTGGCCTTCAACATAATGGCCAGGATTGATGATGTCCTTTATGCAGATGATACTGTAAAACGATGTGCAGCTGCAGATTCTATCCCTCTGTTCAGCAGGGGCGGTTTTGGGGGTCTTCCCATGCAGAAGCGAATGTCTCCTAGCCCCTTCTCAATTCAACACAGCCCATATGCCTCTCCATTTGCAACCCCATCATTCTGCTCCTCCTCTCCTGTTTCCGGGAGCCCTTGCAGTCCGCGGAGGACACGTGCTGTGAAGAAGAATGCTCAGGCAACGGAATCAAAGACCGAAAAGTTGGCAGCTGCTGATTTTGAGAGGGTATGGTCATATACGGGAAACCTGAGTGCAAGAAGAGCAACTGGTGATGCTCCAGAAAGGGACTGA 1674 0.5006 MGSVSSEEGSDRCGSYSLSADVSESESCSSFRRFDAEGASSSANLSPPPLAASHFNFPPPQVMLPVIGGKDVVVWDHKRDLDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWRREMEWLLCVSDSIVELVPSVQQFPGGGTYEVMATRPRSDLYINLPALKKLDGMLLSMLEGFHDTQFWYVDRGIILGDSKDCDEYGRPSVRQEEKWWLPSPKLPPNGLCEDDRKKLQQCRDCTNQILKAAMAINSSVLAEMEIPGAYVESLPKNGKACLGDIIYRYISADQFSSECLLDCLDLSSEHHTLDIVNRIEAAVNVWRLKDHKKHLSSVKARRSWSGKVKGLVADGEKHHFLSQRAETLLQSLKHRFPGLPQTALDMAKIQYNKDVGQAILESYSRVMESLAFNIMARIDDVLYADDTVKRCAAADSIPLFSRGGFGGLPMQKRMSPSPFSIQHSPYASPFATPSFCSSSPVSGSPCSPRRTRAVKKNAQATESKTEKLAAADFERVWSYTGNLSARRATGDAPERD* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0273 557 Gene3D PRONE domain, subdomain 1 317 456 - -
Lja3g0273 557 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 557 IPR038937 GO:0005085
Lja3g0273 557 ProSiteProfiles PRONE domain profile. 76 456 IPR005512 GO:0005085
Lja3g0273 557 MobiDBLite consensus disorder prediction 1 26 - -
Lja3g0273 557 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 557 - -
Lja3g0273 557 MobiDBLite consensus disorder prediction 502 527 - -
Lja3g0273 557 Gene3D PRONE domain, subdomain 1 76 316 - -
Lja3g0273 557 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 84 450 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0273 Lja-Chr3 2757677 2761490 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0273 - - lja:Lj3g3v3553920.1 988.408