Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0272 ATGAAGCTGATCAATGAGCCACCGCAACTACGTGCCCTGTTGAGCTTCTGCTCAACATTGCTTCTTTTGAACCTTGTTCATGTTTCTGCTGAGGACCCTTATCGATTCTTTGATTGGACTATCACCTATGGAGACATATATCCCCTCGGAGTTAAACAACAGGGCATTCTTATCAATGGCCAATTTCCAGGCCCTGAAATCTACTCTGTCACCAATGACAATTTGGTCATCAATGTGCACAATCACTTGCCCGAGCCGTTTCTTCTATCATGGAATGGTGTTCAGCAAAGGAGAAATTCATACCAAGATGGAGTTTATGGAACTACATGCCCCATTCCTCCTGGCAAGAACTTCACCTACAATCTTCAAGTCAAAGACCAAATTGGAAGCTTCTTCTATTTCCCATCTCTTGCTTTCCACAAGGCAGCTGGTGGCTTTGGTGCCATCAAAATCCTCAGCAGGCCAAGGATTCCAGTTCCCTTCCCAGAACCAGCGGCTGATTTCTCCCTTCTTATTGGAGATTGGTACCAGATTAATCATAAGAAGCTGAAGGCAGTTCTAGATTATGGACACAGACTTCCATCCCCTCAAGCTGTTCTTATTAATGGCCGTGCAAATGGTACAACATTGGCATTTGAACAAGGGAAAACATATAGGATTAGAGTATCAAATGTTGGACTTCAAAACACTCTGAACTTTAGAATTCAAGGCCACACCATGAAATTGGTCGAAGTTGAGGGAACTCACACTGTACAAACAACTTATTCTTCAATAGATGTTCATGTGGGACAGTCTTATTCTGTGCTTGTCACAGCTGATCAAGCACCTAAGGACTACTACATTGTTGCTTCCACACGTTTCACCAACAGGGTTCTCACAAGCACTGGCATCCTTCACTATAGTAACTCCCAGCAATCAGTTTCAGGCCCAATTCCTGGCGGACCAACTACTCAGATCGATTGGTCCCTCGAACAAGCTCGGTCAATCAGGACAAACTTGACTGCTAGTGGACCAAGACCAAATCCACAAGGCTCCTACCACTATGGTCTCATAAACATCAGCAGGACAATCAAGCTAGAGAGCTCAGCAGCACAAGTCAACAACAAGCAGAGATATGCAATCAACAGTGTTTCTTTCACACCAGCTGACACTCCTTTGAAGCTAGCTGATTACTTCAACATTGGTGGTGTTTTCCAACTTGGAAGCATCCCAGATAGCCCTTCTGGTAGACCAATGTATCTTGACACATCCGTCATGGGTGCTGATTTTCGAGCCTTCGTCGAGATCGTGTTTCAGAACCATGAAAGCATCGTCCAGAGCTACCACATTGATGGATACTCATTTTGGGTTGTAGGAATGGACGGTGGCGAGTGGACACCAGCGAGTCGTAACGAGTACAACCTCATAGATGCAGTGTCAAGGAGCACAACACAGGTATATCCTAAATCATGGACTGCAATTTACATGGCACTAGACAATGTGGGAATGTGGAATATAAGGAGTGGATTTTGGGCAAGACAGTACCTTGGGCAACAGTTCTATTTGCGTGTGTATTCACCAGTTGGTTCAATCAGGGATGAATATCCAATTCCAAAGAATGCTCTTCTTTGTGGCAAAGCTGCAGGTAGAGCAACCAGACCACAATGA 1647 0.4469 MKLINEPPQLRALLSFCSTLLLLNLVHVSAEDPYRFFDWTITYGDIYPLGVKQQGILINGQFPGPEIYSVTNDNLVINVHNHLPEPFLLSWNGVQQRRNSYQDGVYGTTCPIPPGKNFTYNLQVKDQIGSFFYFPSLAFHKAAGGFGAIKILSRPRIPVPFPEPAADFSLLIGDWYQINHKKLKAVLDYGHRLPSPQAVLINGRANGTTLAFEQGKTYRIRVSNVGLQNTLNFRIQGHTMKLVEVEGTHTVQTTYSSIDVHVGQSYSVLVTADQAPKDYYIVASTRFTNRVLTSTGILHYSNSQQSVSGPIPGGPTTQIDWSLEQARSIRTNLTASGPRPNPQGSYHYGLINISRTIKLESSAAQVNNKQRYAINSVSFTPADTPLKLADYFNIGGVFQLGSIPDSPSGRPMYLDTSVMGADFRAFVEIVFQNHESIVQSYHIDGYSFWVVGMDGGEWTPASRNEYNLIDAVSRSTTQVYPKSWTAIYMALDNVGMWNIRSGFWARQYLGQQFYLRVYSPVGSIRDEYPIPKNALLCGKAAGRATRPQ* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0272 548 CDD CuRO_1_AAO_like_1 36 151 IPR034273 GO:0005507
Lja3g0272 548 Gene3D - 34 155 IPR008972 -
Lja3g0272 548 Pfam Multicopper oxidase 168 302 IPR001117 -
Lja3g0272 548 SUPERFAMILY Cupredoxins 25 181 IPR008972 -
Lja3g0272 548 PANTHER MULTI-COPPER OXIDASE 17 541 IPR045087 -
Lja3g0272 548 Pfam Multicopper oxidase 41 154 IPR011707 GO:0005507
Lja3g0272 548 SUPERFAMILY Cupredoxins 161 340 IPR008972 -
Lja3g0272 548 Gene3D - 349 545 IPR008972 -
Lja3g0272 548 Gene3D - 165 339 IPR008972 -
Lja3g0272 548 PANTHER MULTI-COPPER OXIDASE TYPE I FAMILY PROTEIN-RELATED 17 541 - -
Lja3g0272 548 SUPERFAMILY Cupredoxins 350 539 IPR008972 -
Lja3g0272 548 Pfam Multicopper oxidase 384 519 IPR011706 GO:0005507|GO:0016491
Lja3g0272 548 CDD CuRO_3_AAO_like_1 381 501 IPR034275 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0272 Lja-Chr3 2751856 2756183 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0272 - - gmx:100818914 1008.82