Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0269 ATGGGAGAAGAAGCTCATGAACATTTCAAATCAGAAAATGCTCTGCTTCTCTACTCTGATGCAACCTTCAAGCCCCCACTTTCTCCTCCTATGTTCATAAACATTAGTTTTCATTCACAGTCACACACATCACAAGATCACAACCCTTCTGCTTTTGAATCTCATCCTTCATCCTCAACCTCACCAATTAATGTCCTCCAGCATCAGCATCCTAAAGATGCGTGGCTTCCTCTCACAGAATCAAGAAATGGCAATGCTTACTCTGCAGCTTTCCATATCCTCTCTTCCAACATTGGATTTCAAGCTCTCATGCTTCCTGTTGCTTTCGCCACTCTTGGATGGGCATGGGGGGCCATATGCTTGTCATTAGCATTTGTTTGGCAGCTCTACACCATATTTCTTCTTGTTCAACTTCATGAATCTGTCCCTGGAACTCGTCACAGTAGATACCTCTTCCTTGCCATCACTGCATTCGGTTCAAGGCTTGGAAAGTTAGCAGCATTATTCCCAGTAATGTACCTCTCAGGAGGAACATGCGTGATGTTCATCATCACCGGTGGTAGGACCCTCAAGCTCCTATTCAACACACTCTGCGACAACGATTGCGACGCGCACTCGCTCACTGGCGTGGAGTGGTTCTTGGTGTTCACTTGCGTGGCCATTCTCATCGCACAGTTGCCAAACCTCCACTCACTCACCGCTGTCTCTCTCGTCGGTGCCGTCACTGCCATAACCTACTGCACCCTCTTCTGGTTCCTCTCTGTTAAGAAGGGTAGGCCCCACGGTGTTTCCTACACTTCGTCGTTGAGCCATGGTTCTGCTGTGGATAAGATCAGTGATGTTTTGAATGCCATTGGAATCATTGTCCTCGCTTTCAGAGGTCACAATGTTTTGCTTGAGATACAGGGAACGTTACCTTCAAATATCGTGGAAACTTCGAAAGGACCGATGCGAAGAGGAGTGAGCATTTCCTATATACTCATTGCCATGTGCGTGTTCCCTCTCGCGATTGCAGGATTCTGGGCTTATGGGAACCAGATACCAGATGGAGGGTTGTTAACTGCATTCCCGCAATTTCACAGGGAGCAAGTAACGAAATTCTCAATGGGGGCAATGTATCTTTTGATAATAATACACTGTTTGAGCAGCTTCCAAGTCTATGCCATGCCTGTTTTCGACAACCTTGAGCTGAGATACACGAGCATGAAGGACAAGAAGTGTCCACGGTGGGTGAGAACATGCCTCCGTTTATTCTTCGGTGGGTTCACGTTCTTCATGGCAGTCACGTTCCCGTTCCTGCCAAGCCTATCAGCATTGCTTGGAGGGTTCACCCTGGTGCCAGTTACATATGCTTACCCCTGTTTCATGTGGTTATCCATTAAGAAACCTCGCGTAAAGGGTGTGGTGTGGTGGTTCAACCTTGCACTTGGATGCTTAGGGATGTTTCTCAGTGTTCTTTTGGTGGCTGCTGCTATCAAGGCTCTAGCTGATAAAGGCCTACACGCTAACTTCTACAAACCGTGA 1524 0.4738 MGEEAHEHFKSENALLLYSDATFKPPLSPPMFINISFHSQSHTSQDHNPSAFESHPSSSTSPINVLQHQHPKDAWLPLTESRNGNAYSAAFHILSSNIGFQALMLPVAFATLGWAWGAICLSLAFVWQLYTIFLLVQLHESVPGTRHSRYLFLAITAFGSRLGKLAALFPVMYLSGGTCVMFIITGGRTLKLLFNTLCDNDCDAHSLTGVEWFLVFTCVAILIAQLPNLHSLTAVSLVGAVTAITYCTLFWFLSVKKGRPHGVSYTSSLSHGSAVDKISDVLNAIGIIVLAFRGHNVLLEIQGTLPSNIVETSKGPMRRGVSISYILIAMCVFPLAIAGFWAYGNQIPDGGLLTAFPQFHREQVTKFSMGAMYLLIIIHCLSSFQVYAMPVFDNLELRYTSMKDKKCPRWVRTCLRLFFGGFTFFMAVTFPFLPSLSALLGGFTLVPVTYAYPCFMWLSIKKPRVKGVVWWFNLALGCLGMFLSVLLVAAAIKALADKGLHANFYKP* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0269 507 Pfam Transmembrane amino acid transporter protein 83 491 IPR013057 -
Lja3g0269 507 PANTHER OS05G0424000 PROTEIN-RELATED 69 503 - -
Lja3g0269 507 MobiDBLite consensus disorder prediction 41 63 - -
Lja3g0269 507 PANTHER LYSINE HISTIDINE TRANSPORTER-LIKE 7 69 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0269 Lja-Chr3 2725847 2729748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0269 66 507 Organic Solute Cotransporters AT1G47670 52.036 6.80e-158 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0269 - - gmx:100817315 754.977