Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0262 ATGAACAAGCTCGTCCGTTCCACTCTCAGAAACAAGACTCTGTCATCTTTAGCATATGCTGCGGTTTCCAGAAGTTTTCAGGAAAATGTCCTTCAAGCTCCCTTATGGTCTAGATCATATAGTACAGAATCTTCCTTGGCAAAGGATGATTCAACCAGTGGTGACAAAAGTGAAGGGTTCAAATCCCATGATATGCTTGCCCCTTTCACCGCTGGATGGCAGACTGATTTGACTCCTTTGATTATAGAAAAGTCAGAGGGAAGCTATGTATATGACGTTAATGGGAAGAAATATCTTGATGCACTTGCTGGTCTATGGTCCACTGCTCTAGGGGGAAATGAGCCCCGCCTTGTTGAGGCTGCCAATGCACAGTTAAAGAAGTTACCGTTTTATCATTCCTTTTGGAATCGGACCACAAGACCTTCTTTGGATTTAGCCAAGGAACTCCTAGAAATGTTTACAGCAAGAAAAATGGCTAAAGCTTTTTTTGTTAATAGTGGATCAGAAGCCAATGACACACAGGTGAAACTTGTATGGTATTATAACAATGCACTTGGAAGACCGGATAAGAAGAAATTCATAGCTCGTTCTAAATCGTATCATGGTTCTTCATTGATAACAGCCAGTCTATCCGGCCTTCCAGCTTTGCATCAAAAGTTTGATCTCCCAGCACCTTTTGTCTTGCACACTGACTGTCCACATTATTGGCGGTTTCATCTTCCAGGTGAGACAGAGGAAGAGTTTTCAACCAGATTGGCCAACAATCTGGAGGAGCTAATTCTGAAAGAGGGACCAGACACAATTGCTGCATTCATAGCTGAACCAGTGATGGGGGCAGGAGGTGTAATACTTCCACCATCAACATATTTTGATAAGATCCAAGCTGTTCTCAAGAAGTATGACATTCTACTTATTGCGGATGAGGTGATCTGTGCCTTTGGAAGGCTTGGGACAATGTTTGGATGTGACAAGTACAACATTAAGCCTGACCTTGTTTCCTTGGCAAAAGCACTTTCTTCTGCCTATTTACCAATCGGAGCTGTCCTTGTGAGCCCAGAAGTTTCAGAAGTCATATACTCGCAGAGCAACAAACTTGGTAATTTTTCTCATGGATTCACTTATTCTGGACACCCTGTATGCTGTGCTGTTGCAATTGAAGCACTCAAGATTTACAAGGAAAGAAATATCCTTGATGTAGTGAACAAGATATCCCCAAGGTTCCAAGATGGCATGAGAGCTTTTTCTGACAGTCCTATCATTGGAGAGATACGGGGAACTGGCTTGATTATGGGGACGGAGTTCTCAGACAACAAATCACCTAATGATCCATTTCCTTCTGAATGGGGAGTAGCGACTTATTTTGGAGAACAATGTGAGAAAAATGGGCTGTTAGTTCGTGTAGCTGGAGATAATATCATGATGTCTCCACCATTTATAATTTCCCCAGAAGAAGTTGATGAGTTAATCAGCAAGTATGGTAAAGCTTTAGCAGCGACGGAAAAGCGAGTTCAGGAGCTCAAGTCTCAGCGCAAGTAG 1536 0.4258 MNKLVRSTLRNKTLSSLAYAAVSRSFQENVLQAPLWSRSYSTESSLAKDDSTSGDKSEGFKSHDMLAPFTAGWQTDLTPLIIEKSEGSYVYDVNGKKYLDALAGLWSTALGGNEPRLVEAANAQLKKLPFYHSFWNRTTRPSLDLAKELLEMFTARKMAKAFFVNSGSEANDTQVKLVWYYNNALGRPDKKKFIARSKSYHGSSLITASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLANNLEELILKEGPDTIAAFIAEPVMGAGGVILPPSTYFDKIQAVLKKYDILLIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYLPIGAVLVSPEVSEVIYSQSNKLGNFSHGFTYSGHPVCCAVAIEALKIYKERNILDVVNKISPRFQDGMRAFSDSPIIGEIRGTGLIMGTEFSDNKSPNDPFPSEWGVATYFGEQCEKNGLLVRVAGDNIMMSPPFIISPEEVDELISKYGKALAATEKRVQELKSQRK* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0262 511 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 304 341 IPR005814 GO:0008483|GO:0030170
Lja3g0262 511 Pfam Aminotransferase class-III 78 495 IPR005814 GO:0008483|GO:0030170
Lja3g0262 511 PANTHER GAMMA AMINOBUTYRATE TRANSAMINASE 1, MITOCHONDRIAL 19 506 - -
Lja3g0262 511 Gene3D Aspartate Aminotransferase, domain 1 80 496 IPR015422 GO:0003824
Lja3g0262 511 SUPERFAMILY PLP-dependent transferases 73 496 IPR015424 -
Lja3g0262 511 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 19 506 - -
Lja3g0262 511 Gene3D - 114 396 IPR015421 GO:0003824
Lja3g0262 511 CDD OAT_like 69 496 IPR005814 GO:0008483|GO:0030170
Lja3g0262 511 Coils Coil 489 509 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0262 K16871 - gmx:100792355 894.804