Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0257 ATGGCAACAACACTTAGCACTAGCTTGGCCATGGCAATTTTGTTGGTTGTTGCATCATTGATGTGTAACACAACCCAGGTTTCAGCTCAATGTGGAGCAAACGTTGGAGACCTCATATCCCAGTGTGAAAAGTTTGTGCAGAAGGCCGGACCTACGATTCCGCCATCGCCGGGGTGCTGTGCAGTGCTGAAAAACGTGAATGTTCCATGCGCTTGCAGACTTATCACAAAAGATGTTGAGAAGTTAGTGAGTGTTCCAAAGGCAATATTTGTTGCTCGCTCTTGTGGATTGAATGTTCCAGCTGGAATGCAATGTGGATCTGTTAAAGTGCCGCCCAAGCCATGA 345 0.4696 MATTLSTSLAMAILLVVASLMCNTTQVSAQCGANVGDLISQCEKFVQKAGPTIPPSPGCCAVLKNVNVPCACRLITKDVEKLVSVPKAIFVARSCGLNVPAGMQCGSVKVPPKP* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0257 114 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 30 108 IPR036312 -
Lja3g0257 114 CDD nsLTP_like 31 100 IPR044741 -
Lja3g0257 114 Pfam Probable lipid transfer 11 105 IPR016140 -
Lja3g0257 114 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 5 113 - -
Lja3g0257 114 PANTHER LIPID TRANSFER PROTEIN 5 113 - -
Lja3g0257 114 Gene3D - 27 102 IPR036312 -
Lja3g0257 114 SMART aai_6 31 105 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0257 Lja-Chr3 2596774 2597577 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0257 13 111 Acyl Lipid Metabolism Gene Families AT4G33550 41.346 1.42e-27 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0257 - - cam:101501404 160.614