Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0240 ATGGATAGCTTACTAGCCACTTACAAAGACGAAGAAGAAGAAGAAGATGAAGAGGAGGCTCCACCCACAACCACCACCACATCCACCGCCGCCGACGGTGGCGACGGAGGAGGAGTAGCAGTTGGTGCTGACACGGAACCAATACCAATCGACGTTCCACCCGTCGTTACCAGCACTCCCTCAGACACCCAAACAGAACCCCAAAACGACGGCAGATCAGAGCCCGACCCCTCCGACGACCTCTCCTCCGAAGAAGCCGCTTCCGACGGCTCTAAGAAGTCACCGAAACGCGAACTCGACGAGGAACAGCAACCTGCTTCGAAGAAGCAGAAGCCGCTCTCCTCTCTCAGCGCCGCGAATCAGGACTCGCCGGCATTGCCGGAGGGAGACAATGCCCCGGCGAGCACCCCGGCGGCGACGAATGGCGGGACGACGAATCCGAAGAAATCGAAGAAGAAGAACAACAATGTGTGGGCGACGAAATCGAAGAAAGGGAAGAAGAAGAACAAGGGCAACAACAACAATAACAACAACCACGCCAACAATGGGGAAGACAATGTCCTGATAACTCCCGTTCAGCGGTTTCCGGACAAGGGCGACGACACGCCGGAGATGAAGATATGCTTGTCGAGGGCGTTCAAGGCGGAGAAGGTGGAGCTGAGCGAGGATAGATTGACTGCAGGGAGCACGAAGGGTTACAGAATGGTGAGGGCAACCAGAGGGGTGATGGAAGGTGCGTGGTACTTTGAGATTAAGGTTGTGAAGTTGGGTGAGACTGGGCACACTCGATTGGGGTGGTCCACGGCGAAGGGTGATTTGCAGGCACCGGTTGGGTACGATGGGAATAGCTTTGGGTACAGGGACATTGATGGGAGTAAGATACACAAGGCATTGAGGGAGAAGTATGGGGAGGAAGGGTACAAAGAAGGTGATGTTATTGGGTGCTATATCAATTTGCCTGAGGGAGCCAAGTATGAACCAACAGCACAAAACTTGGCGTGGTATAAAGGCCAGAAATATGCTTATCCTAAAGATGGTAAGGAAGAACCACCTAAAGTGGTGCCAGGAAGTGAGATATCTTTCTTTAAAAATGGTGTATGCCAAGGGGTAGCTTTCAAGGATCTTTACGGTGGTCGTTACTATCCTGCTGCTTCAATGTATACTCTCCCCAATGAACCTAACTGCACTGTCAAGTTCAACTTTGGTCCTGACTTTGAATTCTTTCCTGAGGATTTCAATGAGCGGCCAATTCCCAGACCAATGATTGAAGTTCCGTATCAAAGTTTTGACAATCGAGTTGAAAATGGAGAACCTAATGAGAAGAAACCCTAG 1332 0.5128 MDSLLATYKDEEEEEDEEEAPPTTTTTSTAADGGDGGGVAVGADTEPIPIDVPPVVTSTPSDTQTEPQNDGRSEPDPSDDLSSEEAASDGSKKSPKRELDEEQQPASKKQKPLSSLSAANQDSPALPEGDNAPASTPAATNGGTTNPKKSKKKNNNVWATKSKKGKKKNKGNNNNNNNHANNGEDNVLITPVQRFPDKGDDTPEMKICLSRAFKAEKVELSEDRLTAGSTKGYRMVRATRGVMEGAWYFEIKVVKLGETGHTRLGWSTAKGDLQAPVGYDGNSFGYRDIDGSKIHKALREKYGEEGYKEGDVIGCYINLPEGAKYEPTAQNLAWYKGQKYAYPKDGKEEPPKVVPGSEISFFKNGVCQGVAFKDLYGGRYYPAASMYTLPNEPNCTVKFNFGPDFEFFPEDFNERPIPRPMIEVPYQSFDNRVENGEPNEKKP* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0240 443 SMART SPRY_3 244 405 IPR003877 GO:0005515
Lja3g0240 443 MobiDBLite consensus disorder prediction 1 185 - -
Lja3g0240 443 SUPERFAMILY Concanavalin A-like lectins/glucanases 208 409 IPR013320 -
Lja3g0240 443 MobiDBLite consensus disorder prediction 108 124 - -
Lja3g0240 443 CDD SPRY_Ash2 218 405 - -
Lja3g0240 443 MobiDBLite consensus disorder prediction 171 185 - -
Lja3g0240 443 MobiDBLite consensus disorder prediction 56 71 - -
Lja3g0240 443 ProSiteProfiles B30.2/SPRY domain profile. 187 406 IPR001870 -
Lja3g0240 443 MobiDBLite consensus disorder prediction 7 21 - -
Lja3g0240 443 MobiDBLite consensus disorder prediction 154 170 - -
Lja3g0240 443 Gene3D - 205 419 IPR043136 -
Lja3g0240 443 MobiDBLite consensus disorder prediction 134 153 - -
Lja3g0240 443 PANTHER SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 63 428 IPR037353 GO:0048188|GO:0051568
Lja3g0240 443 Pfam SPRY domain 247 322 IPR003877 GO:0005515
Lja3g0240 443 MobiDBLite consensus disorder prediction 72 107 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0240 K14964 - gmx:100816796 549.28