Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0238 ATGGCCCCAAACAAGCTCAATCCTCCGGGAAATGAAAATATGTCCTGTTCACAGCCTGAGAATGGTTTTATCAGTTCCTTTTCGCTCTTCCCTGAGAAAGCGGTGCAAGACCTTCTTCAGTCTCCAGTCCAAGGGTCGGATGACCATCTTGTAGAGTTCTCTGAAGCTTTAAGAACCGTCGCAAAGGCACTTAGGCGAGCTGCCGAAGGAAAAGCTTCTGCTCAAGCTGAGGCTGCTGAATGGAAACGTAAATTTGAGTTGGAGAGGATGCGGAATCTACATATTGAAGACAAAGAGAACTCATGCCTAGAGCAACAGGCTGATCTTGATGTTTTGAAGGCAAATAACCCTGCCAAACATCCTACATTGCATAATGAAGCTAATGGGCAGTCTGAAAATGAAGCCAATGGACAGTCTGAAAAATGTTGTTCAAGGAACGGTATTTGTTCCCATGGGGTTCTTAGGGATGGAAAACCCAATTCTGATTCCAAGATGATCAGAAAGGCTTCATTTAAACTTTCATGGTTCTCTAAAGGTGAACAGAGTGATCAACACAAACATGACATTGTCTCTTTTGAAAGAGGAAATATAACCACGGCAGAGCGCAGTAGTAAGCAGATCTCTCTGAAATGGGAGTCATGCCCACAGACAGTGCTCATACTGTCCAAACCAAATTCCGTATCAGTTCAAATTCTGTGTGCTGAAATGATAAGATGGTTGAGGCAGCAAACGAAACTACACGTCTATGTGGAACCACGAGTCAGGGTGGAACTTTTGACGGAGTCATCGTACTTTAACTTTGTAGAAACTTGGAATGATGATAAGGAAATTTTGATGCTGCACACTAAAGTTGACCTCGTGATAACTCTTGGCGGAGATGGCACTGTCCTATGGGCAGCGTCTATGTTCAAAGGGCCAGTACCTCCTATTGTCCCCTTTTCTTTAGGTTCCCTCGGCTTTATGACCCCTTTTTACAGTGAAAATTACAAAGAATGCCTTGAATCAATTTTGAAGGGTCCCATTAGTATCACATTACGGCATCGTTTGATATGTCATGTTGTACGAGATGCAGCTAAAAGTGAATTTGAAACTGAAGAACCAATACTTGTTCTGAATGAGGTCACCATTGATCGCGGAATATCATCTTTCCTTACAAACCTGGAATGTTACTGTGACAGCTCTTTTGTCACATGCGTGCAAGGGGATGGACTGATCTTATCTACAACATCTGGCAGTACTGCATATTCTTTGGCAGCTGGAGGATCAATGGTCCACCCACAGGTTCCAGGTATTTTGTTTACACCAATTTGCCCCCATTCGCTATCTTTTAGGCCATTGATACTACCAGAGCATGTCACTTTGAGGGTGCAAATACCATTCAACAGCAGAAGCCCTGCATGGGCATCATTTGATGGCAAGGACAGGAAACAGCTAGCCCCGGGAGATGCACTGGTGTGCAGCATGGCACCCTGGCCTGTTCCTACAGCATGTCTAGTTGATTCTACCAATGACTTCTTGCGCAGCATTCATGAGGGTCTCCACTGGAACTTGAGGAAGACACAATCATTTGATGGCCCCCGTGAATCATGA 1590 0.4447 MAPNKLNPPGNENMSCSQPENGFISSFSLFPEKAVQDLLQSPVQGSDDHLVEFSEALRTVAKALRRAAEGKASAQAEAAEWKRKFELERMRNLHIEDKENSCLEQQADLDVLKANNPAKHPTLHNEANGQSENEANGQSEKCCSRNGICSHGVLRDGKPNSDSKMIRKASFKLSWFSKGEQSDQHKHDIVSFERGNITTAERSSKQISLKWESCPQTVLILSKPNSVSVQILCAEMIRWLRQQTKLHVYVEPRVRVELLTESSYFNFVETWNDDKEILMLHTKVDLVITLGGDGTVLWAASMFKGPVPPIVPFSLGSLGFMTPFYSENYKECLESILKGPISITLRHRLICHVVRDAAKSEFETEEPILVLNEVTIDRGISSFLTNLECYCDSSFVTCVQGDGLILSTTSGSTAYSLAAGGSMVHPQVPGILFTPICPHSLSFRPLILPEHVTLRVQIPFNSRSPAWASFDGKDRKQLAPGDALVCSMAPWPVPTACLVDSTNDFLRSIHEGLHWNLRKTQSFDGPRES* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0238 529 Coils Coil 95 115 - -
Lja3g0238 529 MobiDBLite consensus disorder prediction 121 139 - -
Lja3g0238 529 Pfam ATP-NAD kinase C-terminal domain 371 488 - -
Lja3g0238 529 Pfam ATP-NAD kinase N-terminal domain 218 339 IPR002504 GO:0003951|GO:0006741
Lja3g0238 529 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 217 521 IPR016064 -
Lja3g0238 529 Gene3D - 205 516 IPR017438 -
Lja3g0238 529 Hamap NAD kinase [nadK]. 216 515 IPR002504 GO:0003951|GO:0006741
Lja3g0238 529 Coils Coil 64 84 - -
Lja3g0238 529 PANTHER NAD KINASE 1-RELATED 1 529 - -
Lja3g0238 529 MobiDBLite consensus disorder prediction 116 139 - -
Lja3g0238 529 Gene3D - 348 491 IPR017437 GO:0003951|GO:0019674
Lja3g0238 529 PANTHER NAD KINASE 1 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0238 Lja-Chr3 2412514 2419889 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0238 K00858 - gmx:100806276 945.651