Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0237 ATGTCGATTGCTTTCTGCTTCACTCCTCCCTCTTCCTCCTTTTCCTCCTATTCATGTTCCTACTCTTCCTCCAATAAACCCCTTCCTCCTCTTTCCCTCTCCTCCCTCCGCCTCCGCCTCCGCCTCACTCCCTCTCCCCTCTCTTCACTTCACCAACACCGCCGCCGCCGCGCGGATCTCCCTTTCGTTCTCCACTCCACCGCCGGCGGAGGCGGCGGAGGAGGATCGTTCGGTGGTCACGGAGGAGGTGGCGGCGACGGAGACTCAGGCAATGACGGCAAGAGGGACGCGATTATGGTGCTGGCGGAGGCAGGGAGGAGTCTAGAGAGCGTGCCGTCTGACTTGGCGGCGGCGATCAAGGAAGGGAAGATCCCTGCGTCCGTCGTGTCTCGTTTTCTGGAGCTGGAGAAGTCGCCGCTGTTCCGGTGGCTGCTTCAGTTCACTGGGTTCAAGGAGCGTCTTCTCGCTGATGATCTCTTCCTGGCTAAGATTGGCATGGAGTGCGGTGTTGGCGTCTTCACCAAGACTGCTGCCGAGTACGACCGAAGGAGGGAAAACTTTTTCAAGGAGATTGAAATTGTGTTTGCCGATGTGGTCATGGCCATACTTGCAGATTTCATGCTGGTTTATCTTCCTGCACCGACTGTTTCTCTTAGAGCACCACTTGCAATCAATGCAGGGCATATTGCTAAGTTTTTCCACAACTGCCCAGACAATGCATTCCAGGTTGCTCTCTCTGGAACATCATATTCTATATTACAGAGGATTGGTGCGATTGCGCGTAATGGGACTAAGCTTTTTGCAGTTGGAACTGCTTCATCACTGGTAGGGACAGCGATGACAAATGCCTTAATTAATGCAAAGAAGGCTGTTGGTAAGGATTCTGATGGGGAACTTGAAAATGTTCCCATATTGTCTACCAGTGCTGCCTATGGTGTCTATATGGCCGTTTCTAGCAACCTCAGGTATCAAGTTCTTGCTGGAATCATTGAACAGAGGTTATTGGAACCTTTACTGCACCAGCACAAGCTTGTGCTTAGCGCACTTTGCTTTGCTGTTCGAACCGGCAATACATATTTGGGTTCATTATTGTGGGTGGACTATGCTCGTTGGATAGGAGTTCAGTAG 1128 0.5186 MSIAFCFTPPSSSFSSYSCSYSSSNKPLPPLSLSSLRLRLRLTPSPLSSLHQHRRRRADLPFVLHSTAGGGGGGGSFGGHGGGGGDGDSGNDGKRDAIMVLAEAGRSLESVPSDLAAAIKEGKIPASVVSRFLELEKSPLFRWLLQFTGFKERLLADDLFLAKIGMECGVGVFTKTAAEYDRRRENFFKEIEIVFADVVMAILADFMLVYLPAPTVSLRAPLAINAGHIAKFFHNCPDNAFQVALSGTSYSILQRIGAIARNGTKLFAVGTASSLVGTAMTNALINAKKAVGKDSDGELENVPILSTSAAYGVYMAVSSNLRYQVLAGIIEQRLLEPLLHQHKLVLSALCFAVRTGNTYLGSLLWVDYARWIGVQ* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0237 375 PANTHER PROTEIN RETICULATA-RELATED 4, CHLOROPLASTIC 1 375 - -
Lja3g0237 375 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 1 375 - -
Lja3g0237 375 Pfam Protein RETICULATA-related 152 329 IPR021825 -
Lja3g0237 375 MobiDBLite consensus disorder prediction 73 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0237 Lja-Chr3 2406204 2411356 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0237 - - gmx:100811998 494.967