Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0234 ATGAGCATCGGTGAAGGAAAGTTGGTGTGTGTTACTGGTGCTTCTGGCTATGTTGCTTCATGGATTGTCAAGTTTCTTTTGGAACATGGTTACACTGTTAGAGCCACTGTTCGTGACCCCAGTAATCCCAAGAAGGTTGAGCACTTGGTTAAACTTGATGGAGCAAAAGAGAGATTGCATCTGTTTAAGGCAGATTTGTTAGAAGAAGGTTCCTTTGACTCTGCTATTCAGGGATGTGATGGTGTCTTTCACACTGCTTCACCTGCTCGCCATATCGTCAAAGATCCACAGGCTGAGTTGATTGGTCCAGCAGTGGAGGGAACTCTTAATGTTCTTAAGTCATGCGCAAAATCACCATCTGTGAAACGAGTTGTCTTAACTTCTTCTACTGCTGCAGTTCAATTTAATGAAAGGCATAAAAGTTCAGTAGTGGTTGATGAGACATGGTATTCAGATCCAGATTTCTGTAGGGAATCAAAGATGTGGTATGCCCTTTCAAAGACCCTGGCTGAGGATGCTGCATGGAAATTTGTAAATGAAAACAGAATTGATATGGTTGTTATTAACCCAACAACGGTGGCTGGACCTCTCTTACAACCAGAGGTTAATCTTAGTGTTGAGCCAATTTTAGACCTAATTAATGGTGTGCCATTTCCAAATAGATCAATTGGATGGGTTGATGTGAAAGATGTTGCTAAAGCACATATTCAAGCATATGAGATTGCTTCAGCTAGTGGAAGATATTGTTTGGTTGAGAGAAGGGTACACTACTCTGAACTTGCTAGGATTGTACATGATCTGTACCCAACCCTACACATTTCAAATAAGTGTGAAGACGATGGGCCTTATATGCCATCATATCAATTTTCCCAAGAAAAGGCCAAGAGCTTAGGAATTGAGTTTACTCCTTTAGAAATAAGTATCAAAGAGACTGTGGAAAGCTTTAGAGAAAAGAAGATAGTCAGCTTTTAA 972 0.4053 MSIGEGKLVCVTGASGYVASWIVKFLLEHGYTVRATVRDPSNPKKVEHLVKLDGAKERLHLFKADLLEEGSFDSAIQGCDGVFHTASPARHIVKDPQAELIGPAVEGTLNVLKSCAKSPSVKRVVLTSSTAAVQFNERHKSSVVVDETWYSDPDFCRESKMWYALSKTLAEDAAWKFVNENRIDMVVINPTTVAGPLLQPEVNLSVEPILDLINGVPFPNRSIGWVDVKDVAKAHIQAYEIASASGRYCLVERRVHYSELARIVHDLYPTLHISNKCEDDGPYMPSYQFSQEKAKSLGIEFTPLEISIKETVESFREKKIVSF* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0234 323 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 4 321 - -
Lja3g0234 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 317 IPR036291 -
Lja3g0234 323 CDD FR_SDR_e 9 298 - -
Lja3g0234 323 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 321 - -
Lja3g0234 323 Pfam NAD dependent epimerase/dehydratase family 9 239 IPR001509 -
Lja3g0234 323 Gene3D - 7 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0234 Lja-Chr3 2384847 2389553 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0234 4 323 Miscellaneous Gene Families AT5G19440 66.770 5.69e-162 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0234 - - gmx:100799213 508.064