Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0232 ATGAGCAATGGGGAAGGAAAGTTGGTGTGTGTGACTGGTGCTTCTGGCTATATTGCTTCATGGATTGTCAAGTTTCTTCTCCAGCGTGGTTACACTGTTAGAGCCACTGTTCGTGACCCCAGTAATCACAAGAAGGTTGAGCACTTGTTTAAACTTGATGGAGCAAAAGAGAGGTTGCATCTGTTTAAGGCAGATTTGTTAGAAGAAGGTTCCTTTGACTCTGTTATTCAGGGATGTGATGGTGTCTTTCACACAGCTTCACCTGTTCGTTTTATTGTCAAGGATCCACAGGCTGAATTGATTGATCCAGCAGTGAAGGGAACTCTTAATGTTCTGAAATCATGCGCAAAATCACCATCTGTGAAACGAGTTGTCTTAACTTCTTCTGTTTCTGCAGTTCAATTTAATGAAAGGCCTAAAAGTCCAGAAGTAGTGGTTGATGAGACATGGTTTTCAGATCCAGATTTCTGCAGGGAATCAAAGTTGTGGTACACACTTTCAAAGACTTTGGCTGAGGATGCTGCCTGGAAATTTGTAAATGAAAACAAAATTGACATGGTTGTTCTTAACCCGTCACTGGTGTCCGGACCTCTCTTACAACCAGAGGTTAATTATAGTGTTGAGCGAATTTTAAACCTAATTAATGGTGTCCCATTTCCAAATTCGTCTATGGGATGGGTCGATGTGAAAGATGTTGCTAAAGCACATATTCAAGCATATGAGATTGCTTCCGCTAGTGGAAGATATTGTTTGGTCGAGAGAGTGGTACACTACTCTGAACTTGCTAGGATTTTAGGTGATCTGTACCCAACAATACAAATTTCAAACAGGTGTGAGGACAATGGACCTTATGTGCCTACATATCAATATTCCCAAGAAAAGGCCAAGAGTTTAGGAATCGAGTTTACTCCTTTAGAAATAAGCATCAAGGGAACTGTGGAAAGCTTTAGAGAAAAGAAAATCGTCAACTTTTAA 975 0.4051 MSNGEGKLVCVTGASGYIASWIVKFLLQRGYTVRATVRDPSNHKKVEHLFKLDGAKERLHLFKADLLEEGSFDSVIQGCDGVFHTASPVRFIVKDPQAELIDPAVKGTLNVLKSCAKSPSVKRVVLTSSVSAVQFNERPKSPEVVVDETWFSDPDFCRESKLWYTLSKTLAEDAAWKFVNENKIDMVVLNPSLVSGPLLQPEVNYSVERILNLINGVPFPNSSMGWVDVKDVAKAHIQAYEIASASGRYCLVERVVHYSELARILGDLYPTIQISNRCEDNGPYVPTYQYSQEKAKSLGIEFTPLEISIKGTVESFREKKIVNF* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0232 324 CDD FR_SDR_e 9 299 - -
Lja3g0232 324 Pfam NAD dependent epimerase/dehydratase family 9 241 IPR001509 -
Lja3g0232 324 Gene3D - 7 324 - -
Lja3g0232 324 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 322 - -
Lja3g0232 324 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 3 322 - -
Lja3g0232 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 318 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0232 Lja-Chr3 2370982 2374846 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0232 1 324 Miscellaneous Gene Families AT5G19440 68.098 5.85e-168 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0232 - - gmx:100799213 538.495