Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0227 ATGTCCACAGCACCACCACCATCAAGAAGACCCAAATGGCACCACCACCCACCTCCTCCTCCCACACCCAGAATCCTTCACTTCCCTCGCCGCCCTCGCCGGAGACCCTCCTCCTCCGCCGCCCGAACGGACCTTAAATGGAACAGGTTGGGAGCTTTGTTTGATCGAGAGAAACGGGTACCTGATCATAAGAATGTTCCGATAGTGCTGTTGGACCATGGTGGTGGTGAGGGGAGAAGGGAGAGAGTTGAGAGCAGCGAATGCGGTGGTGGGTCGGCGTTGGAGGAAGAGAAGTGGAAGTTTCAGGCGGAGATGTTGAGGGCAGAGTGTAACTTGTTGAGGATGGAGAAGGAGATTGCGGTCAAGAAGTTGGAGAGGACTCGTGCAAAGATGGAGAGGATTCTAAGATCTGCAGTTCGCACCCTTGTTTCTGGAAGAATAAAGATTTGTGAAGGAAAGAATATTAATATGGTTTTGGATGAAGAGATTCATGCCTTGACAGAGAAACTTCAGAAGTTGCAGAAGCGATCGTTAGTTAAGGACTTTGAGACTAGGAACAGCAGAAACTTTGACAAACAAGTTTCTGTTCTGCAGAGACGACTGGAGAGGATTGGAGGACCATCAGATGAGATTTATTTGAGAGAGTTTGAAGAGCTGGCAAATGTGAGCTTGTCAATTAAAACAAGTAGCAGATTTGATGATAGCATTGTTGCAAGTGGAAAACTAAATGTGGAAATTCTGAGAAGGAAAATGGAGGGATTGTCAAAGGGGATATTGTTACAGAGAATGGAGGAAGAGTATAATTCTCTGTTGTCCACTGCTAATAGTTCTGTTACCAGTTCTGCTTCAACTTCCAAGAGAGTTGAATTTCAAGATTCATCTTCTTCAATACGAGAAAAGTTGTCTTATGAAGGGAACCCGTGTTCCGGACATTGCAAGTCAGTTGTACGAAGAATCGTAGAGCAAGTTAGAACTGAGACTGAGCAATGGTCCCAAATGCAGGAGATGCTTGGTCAGGTGAGGGAGGAGATGGAGGAATTGCAAGCTTCTAGGGATTTTTGGGAAGATCGGGCCCTGCATTCCGATTTTCAAATCCAATCCCTACACAATTCTTTGCAAGAATGGAGACAAAGAGCGCTTTCATTTGAAAGTGAAAAGAATGAGCTTAGAGCAAAACTGTCCATGCTCAGTGGTGATCTTGAAAGGTTAAGAAAGGAACAAAATTCAGTTCAGGGGTCCAAATGTTCATCGATTCCCTTGGACACACAGAATGAGTTCGAGAAGCGTGTAGTGGTTTGTTGCTCAAAAGAGAACAATAGCATAGTTACAGAAAATAGCAAGCATAATGAGGGTATGAGGAATGGGGAAAGAAAGGCACATGCTGGTAGAGGTGGATTCCAAGCTCCAAAACGATCACCATTCCAAGACATTGGGAACTCATCATTGTTGATGAAGCAGAATGGTGGCAAAGCAATTTTCCCTTTGCATTGCCATCTTTCTTCAAATGTTGAGAAATTTTACTCATGA 1527 0.446 MSTAPPPSRRPKWHHHPPPPPTPRILHFPRRPRRRPSSSAARTDLKWNRLGALFDREKRVPDHKNVPIVLLDHGGGEGRRERVESSECGGGSALEEEKWKFQAEMLRAECNLLRMEKEIAVKKLERTRAKMERILRSAVRTLVSGRIKICEGKNINMVLDEEIHALTEKLQKLQKRSLVKDFETRNSRNFDKQVSVLQRRLERIGGPSDEIYLREFEELANVSLSIKTSSRFDDSIVASGKLNVEILRRKMEGLSKGILLQRMEEEYNSLLSTANSSVTSSASTSKRVEFQDSSSSIREKLSYEGNPCSGHCKSVVRRIVEQVRTETEQWSQMQEMLGQVREEMEELQASRDFWEDRALHSDFQIQSLHNSLQEWRQRALSFESEKNELRAKLSMLSGDLERLRKEQNSVQGSKCSSIPLDTQNEFEKRVVVCCSKENNSIVTENSKHNEGMRNGERKAHAGRGGFQAPKRSPFQDIGNSSLLMKQNGGKAIFPLHCHLSSNVEKFYS* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0227 508 PANTHER MYOSIN-LIKE PROTEIN 8 488 - -
Lja3g0227 508 MobiDBLite consensus disorder prediction 445 474 - -
Lja3g0227 508 Coils Coil 156 176 - -
Lja3g0227 508 Coils Coil 337 357 - -
Lja3g0227 508 PANTHER MYOSIN-LIKE PROTEIN 8 488 - -
Lja3g0227 508 MobiDBLite consensus disorder prediction 1 42 - -
Lja3g0227 508 Coils Coil 372 406 - -
Lja3g0227 508 Coils Coil 114 141 - -
Lja3g0227 508 SUPERFAMILY Tropomyosin 321 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0227 Lja-Chr3 2324913 2328529 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0227 - - mtr:MTR_4g077160 671.389