Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0221 ATGGATTACGGCGTGGGATCCATCGTGTGGGTCCGACGACGAAACGGGTCGTGGTGGCCGGGTCAAATACTTGGCCTCGATGATCTCTCCGCTTCTCATCTCACCTCTCCTCGATCAGGAACCCCCGTCAAGCTTCTCGGCCGGGAAGACGCCAGCGTGGATTGGTACAATTTGGAGAAATCTAAGCGTGTTAAGGCGTTCCGATGTGGCGAGTTTGATGATTGTATTGAGAAGGCTGAGTCCGCTCAGGGGGCGCCGTTGAAGAAAAGGGAGAAATATGCGCGTCGAGAAGATGCCATTCTTCATGCCCTTGAACTCGAGAGGCAAATGTTGCAGAAGCAAGCGAAAATAGAGGTAGCAAAGGATGGCAATCAACCTAGTGGTGTGGTTGATGTTTCTGAGGCAAGACCTCAGATGAGAGGTTTGCAGGATTTTGGGCTCAAAATTACCCCCTTGAAAGGAAAGCTTTCATCTTCTGTTGATCCATACATTTCTCAGAAACGTACAGTTGATGAGGGTGCTCAGGATCTTTCAAGTGGTAGTCTTCTCATGGGGAGTACACTTCACATGAATGGAGATGGGCAAGTAGCTCGCAGAGTGAAGAGGAGCAAATATGTGTATTTTCCAGCCGAGTCTAGTGATTCTCTTGATTATAAAGAGTCTCTAGCCCATGCTGAGATGTTATCTCCGCAACTCAGAGGGGAGTTTCCATATCATGGTTCTTTGGTTGGAGAGACTGAATCAACATTTATGGATGACGTTGAGTCTGATTCTTCAGAAACAGATTCTATTGATTCCGATTCAGATTCTTCTGAAACAGAACCAGACATGGATGAAGACATGACTATACTTGCAGAAACTGGTCGTGATGCTGAAGAACATGAAAGCACTAGCAGCGAGGAGCCTGACGAGATAGCAATTATCGGCGACATGCCTCACCTTTATGCTCGTGAAATGATAACAAGTAATGGCGCTGTGTCTAAATGGACACTAAAAGGGAAAAGGAATAATAGGAATCTTGTAAAGAGGTCTTTCAGTTCTTCCAATGGAAAAGGTACTACGTATGGAACAGATGCAGATTTTGAAGGACGAAGAAGTCATTTAAGTCACAAGAGACTGGGTCCAAATATGCATCGCTACATAAATGATTTTAGTGATGCACTTGATGATGATGACGAAATGTTTGGTCTGGAAGATGATTATTCTCAAACCTCTAGAGCTGTATCAAGAAATCGAAATAAAATTCATCATGGTGTTGATTGGGCCAGGGATGACCATCTTGCTTCGAGCGGATATTGGGATACTGAAGGTTTTAGTCCAATATATGGTGATCATTATCATATTGGTGGGAGGATGAGGTCAGCGCTGGTTAATGTAGATTTGGAGGTTAAATCCAGCTATCCGAAGGAGCGTGTACCCCTTGTTTCTCTTATGAGTAAGTTGGACGGGAGGGCAATCGTAGGGCATCCAATCCAGGTTGAAACCCTTAAGGATGGCTCATCTGATTTTCTATTTTCTGCAATTGACGACTTCAGTAATGACGGAAGTAGTGTGCTTCCACCAGCATGGAGGACTGCAAGAAGAACAGCAAATTCTCGCGTCCCGCGCCCTCAAGTATTTTCATCAAATGGAGCTGAAGTTGCTCCAGAGTTTCCCTCCTTAGATCAAGATCCGGACTTTGAATATAGGAAATCCAACACAGGAAGTTCCGGTCACAAGGCAAGCCTTCAAAAGAAGAGTGGCCTTAAAAGTCATCGGTCCTCCACGGACAAAAAGTCCTTGAAAAAGGTGCCAAAGAAGTTGAGCTTGTCATCTAACCAGAAGACTAGAACTCTTTCCTCATTATCTACTGAACATAGTCTTAGTAGAAAGCCATCACATGATAGCAGCAGTAGTTATCCAACAGATAGATTGATTAAACCAGAAATTTCTGTGCCCACCACCGTAGCTTGCATACCAGTCCAGTTAGTATTTAGTAGATTACTTGAGAAGATTAACAGGCCTCCATTAAAGGCAGCTAGTAATGCAGCTTTGCTGAATACTGGTGCGGAAAGGAAATCATAG 2064 0.4443 MDYGVGSIVWVRRRNGSWWPGQILGLDDLSASHLTSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEFDDCIEKAESAQGAPLKKREKYARREDAILHALELERQMLQKQAKIEVAKDGNQPSGVVDVSEARPQMRGLQDFGLKITPLKGKLSSSVDPYISQKRTVDEGAQDLSSGSLLMGSTLHMNGDGQVARRVKRSKYVYFPAESSDSLDYKESLAHAEMLSPQLRGEFPYHGSLVGETESTFMDDVESDSSETDSIDSDSDSSETEPDMDEDMTILAETGRDAEEHESTSSEEPDEIAIIGDMPHLYAREMITSNGAVSKWTLKGKRNNRNLVKRSFSSSNGKGTTYGTDADFEGRRSHLSHKRLGPNMHRYINDFSDALDDDDEMFGLEDDYSQTSRAVSRNRNKIHHGVDWARDDHLASSGYWDTEGFSPIYGDHYHIGGRMRSALVNVDLEVKSSYPKERVPLVSLMSKLDGRAIVGHPIQVETLKDGSSDFLFSAIDDFSNDGSSVLPPAWRTARRTANSRVPRPQVFSSNGAEVAPEFPSLDQDPDFEYRKSNTGSSGHKASLQKKSGLKSHRSSTDKKSLKKVPKKLSLSSNQKTRTLSSLSTEHSLSRKPSHDSSSSYPTDRLIKPEISVPTTVACIPVQLVFSRLLEKINRPPLKAASNAALLNTGAERKS* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0221 687 PANTHER T17B22.17 PROTEIN-RELATED 2 120 IPR044679 -
Lja3g0221 687 PANTHER T17B22.17 PROTEIN-RELATED 195 686 IPR044679 -
Lja3g0221 687 Gene3D - 1 119 - -
Lja3g0221 687 PANTHER PWWP DOMAIN-CONTAINING PROTEIN-RELATED 195 686 - -
Lja3g0221 687 PANTHER PWWP DOMAIN-CONTAINING PROTEIN-RELATED 2 120 - -
Lja3g0221 687 MobiDBLite consensus disorder prediction 251 278 - -
Lja3g0221 687 SUPERFAMILY Tudor/PWWP/MBT 2 109 - -
Lja3g0221 687 ProSiteProfiles PWWP domain profile. 5 60 IPR000313 -
Lja3g0221 687 Pfam PWWP domain 6 86 IPR000313 -
Lja3g0221 687 MobiDBLite consensus disorder prediction 599 635 - -
Lja3g0221 687 MobiDBLite consensus disorder prediction 563 577 - -
Lja3g0221 687 MobiDBLite consensus disorder prediction 529 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0221 Lja-Chr3 2261620 2265285 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0221 - - aprc:113864977 912.138