Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0218 ATGCTTGTCCTCAAACGCTTTCGTAGGAATCCAAATACAATCGCTCAATCGTCTTCCCCGAACCCTCAAATCTTTTCTCTTCCGGCTCCGATTCCTCAATGGCCTCAAGGACAAGGTTTTGCTTCAGGAATTGTAAATCTTGGTGAAATAGAAGTTTTCAAGGTCACTAGGTTTGAGTTTGTGTGGATCAGCAGTGCTGTACCAGGCACGAGAAAACCTGTTACATTTTATAAGCCTGTGGGAGTACCCGATAGTTTCCATATCCTAGGTCACTATTGTCAACCCAGTGACAAGCCTTTAAGGGGTTTTGTACTTGTTGCTAGGGAAGTTGGAACCTGCTCATCCGAAACTACTGATACCGACAACCGGGAGAAGCTACCTCCCCTGAGAAATCCCCTTGATTTTAAGTTAGTTTGGAGTCCTAATGGAGGATGTGGTTACTTTTGGCAACCTCTGCCTCCAGAAGGTTACAAGGCCCTCGGCTACTTGGTTACTAACAAACCTGACAAGCCTGAGTTGGATGAAATGTGTTGCATTCGCGCTGACCTGACTGACAAATGTGAACCTTACCGTGTAATACTTGCTTCCGGTTCTAAAACTCCAGAGTTTTCATTTCAGGTATGGAGCTTGAGACCTTGTGACCGTGGCTTGCTAGGAAAAGGGGTTTCTGTTGGGACTTTTTTCTGCAGTAGTGGCTTTAACACGCGAGAAGAGCTTCCTATTGCATGCTTGAAGAATCTCAATCCTGTGCTACCTGCAATGCCAAATTTGCAACAAATGCATGCACTTATTAAGCATTATGGCCCGACTGTTTTCTTTCATCCTGATGAAGCTTACTTGCCGTCTTCTGTAGCTTGGTTTTTCAGCAATGGAGCCATGTTGTACAGAAAGGGTGTGTCTAAAGGAGAGGGAATTGATGCATCTGGCTCAAATTTACCAGGCGGGGGAACAAATGATGGACAGTTTTGGATAGACTTGCCGAACAATGATCAAAGTCGGCGTTTTCTCAAACGCGGGGACATGAATAGTGCAAGGCTTTATGTTCATGTGAAGCCAGCTCTTGGTGGAACTTTTACAGACATTGCAATGTGGGTGTTTTGCCCCTTCAATGGACCAGCCACTTTGAAAGTAGGGATTAGGAACATAGCTTTGAGCAAAACTGGAGAACATGTTGGTGACTGGGAACATTTTACGCTTCGAATATGCAATTTCAGCGGAGAGCTATATAGTATATACTTTTCACAGCACAGTGGTGGTGAATGGGTTGATGCTTATGACTTGGAATACATTGATGGCAACAAAGCTATTGTGTACGCATCAAAATGTGGACATGCAAGTTACCCTCATGCTGGGACCTATATTCAAGGTTCTGCAAAACTAGGACTTGGCATTAGGAATGATGCTGCTCGTAGTAAGTTGTACCTGGATTCTAGTATTCACTATGAGCTTGTTGCTGCTGAGTATCTACAAAATGCTGTCATTGAACCTCAGTGGTTGCAATTTATGAGAGAGTGGGGCCCCAAGATTGTTTATGATTCCAAAACTGAGCTGGATAAGATCATCAATGCTCTTCCAAAAATGCTTCAACATTCGATGAAGAACTTGTTTAACAAGTTTCCAGTGGAGCTGTATGGTGAGGAAGGTCCTACTGGGCCAAAAGAGAAAAATAATTGGATTGGAGATGAAAGATGGTGA 1695 0.4372 MLVLKRFRRNPNTIAQSSSPNPQIFSLPAPIPQWPQGQGFASGIVNLGEIEVFKVTRFEFVWISSAVPGTRKPVTFYKPVGVPDSFHILGHYCQPSDKPLRGFVLVAREVGTCSSETTDTDNREKLPPLRNPLDFKLVWSPNGGCGYFWQPLPPEGYKALGYLVTNKPDKPELDEMCCIRADLTDKCEPYRVILASGSKTPEFSFQVWSLRPCDRGLLGKGVSVGTFFCSSGFNTREELPIACLKNLNPVLPAMPNLQQMHALIKHYGPTVFFHPDEAYLPSSVAWFFSNGAMLYRKGVSKGEGIDASGSNLPGGGTNDGQFWIDLPNNDQSRRFLKRGDMNSARLYVHVKPALGGTFTDIAMWVFCPFNGPATLKVGIRNIALSKTGEHVGDWEHFTLRICNFSGELYSIYFSQHSGGEWVDAYDLEYIDGNKAIVYASKCGHASYPHAGTYIQGSAKLGLGIRNDAARSKLYLDSSIHYELVAAEYLQNAVIEPQWLQFMREWGPKIVYDSKTELDKIINALPKMLQHSMKNLFNKFPVELYGEEGPTGPKEKNNWIGDERW* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0218 564 Pfam Vacuolar protein sorting-associated protein 62 22 562 IPR009291 -
Lja3g0218 564 PANTHER - 6 564 - -
Lja3g0218 564 PANTHER PROCESSING PROTEIN PRP39, PUTATIVE-RELATED 6 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0218 Lja-Chr3 2242371 2244895 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0218 - - gmx:100793026 902.508