Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0169 ATGGCCACGATGATGATGTCAATTTTTCCACCACCACCAAGCGTGGCTTCATTATTTATACTATCACACTGCACTCACACAATTCGTGTACAATCAACAACGCAGTTCACAGGTTTTTCTATAAGAACCAGAACACGTGATTGTAGTAGAATTCTGTTAACAGAAGAACGAGAAATGGCGGTGATGGAGGAGAAGAAGCTTTTGCAGACCGGAATCGCTGAGTTCTACGACGAGTCGTCCGGGTTATGGGAAGACATGTGGGGAGACCACATGCATCACGGGTTTTACGAGCAGGATGTCACCGTCTCTGTTTCAGACCACCGTGTTGCTCAGATCCGAATGATTGAAGAGTCTCTTCGTTTTGCTGCACTTTCTGAGGATCCAGCTAAAAAGCCAGAGAGTATAGTGGATGTTGGGTGCGGCATAGGAGGCAGTTCTAGGTACCTAGCTAAGAAATTTCAGGCAAAGAGCGTTGGTATCACTCTGAGTCCTGTTCAAGCTCAGAGAGCAAATGCTCTTGCTGCTTCTCAAGGCTTAGCTGACAAGGTTTCCTTTCAAGTTGCTGATGCTCTAGAGCAACCATTCCCTGATGGTCAGTTTGATCTGGTGTGGTCCATGGAGAGTGGAGAGCATATGCCTGACAAACCTAAGTTTGTTGGCGAGTTAGCTCGGGTGGCAGCACCAGGTGGGACCATAATAATTGTAACATGGTGCCACCGGGATCTTGGACCAGCTGAAGAATCCCTGCAGCCATGGGAGCAGAATCTCTTGAAGAGGATATGCGATGCATTTTACCTTCCAGCATGGTGCTCAACTGCTGATTATGTCAAATTGCTGGAATCCCATTCACTTCAGGACATCAAATCAGCAGATTGGTCTCCCTTTGTTGCTCCATTTTGGCCAGCTGTGATACGCTCAGCATTTACATGGAAGGGTCTCACTTCACTGTTGCGCAGTGGAATGAAAACCATAAAAGGAGCTTTGGCTATGCCATTGATGATAGAAGGATTCAAGAAGGGTGTCATCAAGTTTGCCATTGTTACATGTAGAAAGCCTGAAAATGTGGAGATAGAATAA 1077 0.4624 MATMMMSIFPPPPSVASLFILSHCTHTIRVQSTTQFTGFSIRTRTRDCSRILLTEEREMAVMEEKKLLQTGIAEFYDESSGLWEDMWGDHMHHGFYEQDVTVSVSDHRVAQIRMIEESLRFAALSEDPAKKPESIVDVGCGIGGSSRYLAKKFQAKSVGITLSPVQAQRANALAASQGLADKVSFQVADALEQPFPDGQFDLVWSMESGEHMPDKPKFVGELARVAAPGGTIIIVTWCHRDLGPAEESLQPWEQNLLKRICDAFYLPAWCSTADYVKLLESHSLQDIKSADWSPFVAPFWPAVIRSAFTWKGLTSLLRSGMKTIKGALAMPLMIEGFKKGVIKFAIVTCRKPENVEIE* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0169 358 CDD AdoMet_MTases 135 237 - -
Lja3g0169 358 Gene3D Vaccinia Virus protein VP39 77 353 IPR029063 -
Lja3g0169 358 PANTHER METHYLTRANSFERASE 62 348 - -
Lja3g0169 358 Pfam Methyltransferase domain 136 234 IPR013216 GO:0008168
Lja3g0169 358 ProSiteProfiles SAM-dependent methyltransferase gamma-tocopherol (gTMT)-type family profile. 57 353 IPR025774 GO:0008168|GO:0032259
Lja3g0169 358 PANTHER CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 62 348 - -
Lja3g0169 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 71 353 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0169 Lja-Chr3 1710560 1714519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0169 130 247 Acyl Lipid Metabolism Gene Families AT3G18000 36.441 7.56e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0169 K05928 - gmx:732543 518.85