Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0166 ATGGCAAAGTCAGTGATGGCCTCCACGCCATTCCTTTCTTGTCCTCCTCCATACAACAATGCACTAATCAGATCCCTCCACTTGTCTCCTCCTCCTTCTTCCTCTTTCTTCGCCGTAACCATGTCCACCACCACCATCCCACACCCACACCCCTCCTTCGAAATCCTCGGAGGCGCACGTGACCGTTTCCTCCCTACTCTCCCCTTCTTGGCTCGTCCCTACCACCCTTTCCCCTTCCTTGCTTGGAACCGCCACATAGAGACCATCTTCGCCTCCTTCTTCCGCTCCACCCCCGACGTTAAGCTCCGCCGTGAATGCCTCAGAACCCAGGACGGCGGCGCTGTCGCTCTTGACTGGGTTTCCGGTGATGACCCAAGTTTGCCCCCCGATTCTCCTCTCCTCATTCTGCTGCCAGGCCTGACCGGAGGTAGTGGGGATTCTTATGTGAGGCACTTGTTAGCTAGAGCTCGGAGTAAAGGGTGGCGTGTTGTGGTATTCAATAGTCGTGGTTGTGGAGATAGCCCTGTTACCACTCCTCAGTTCTATTCAGCTTCGTTTTTAGGGGATATGCATGAGGTTGTTTCCCATGTCTCTGCTAGATATCCCGAGGCCAATTTATATGCTGTTGGTTGGTCACTAGGGGCAAACATTCTAGTTCGTTACTTGGGTCAGGAATCCCTCAACAGCCCTATTTCTGGTGCTGTATCATTGTGTAATCCTTTCAATTTGGTTGTGGCAGATGAGGACTTCCGAAAGGGCTTTAACATTGTTTATGACAAGGCTCTTTCAAAGGCTCTCTGCAAGATTTTCAAAAAGCATGCTTTACTCTTTGAAGATATAGGTGGTGATTATAATATTCCTATGGCAGCGAACGCCAAGTCTGTTAGGGAGTTTGATGATGGATTGACTCGTGTTTCTTTTGGATTCAAGTCCGTGGATGAATACTATTCTAATTCAAGCAGCTCGGATTCCATAAAACATGTCCAAACCCCTCTGCTTTGCATCCAGGCAGCCAATGATCCGATTGCTCCGAATAGGGGCATTCCTCGTGAAGATATCAAGGAAAATCCAAACTGCTTGTTAATAGTGACACCTAATGGTGGCCATTTGGGATGGGTTGCTGGTGATGAAGCTCCAGTTGGAGCCCCTTGGACTGATCCTCTAGTAATGGATTTTCTTCAACATCTAGAAAATAGAGAAGCAGTTAAAGCCCCAAACACCTCTAGTAACAAAGGAGATAAAGAGACCTTGTACCACCTGCAAGTGTAG 1269 0.4854 MAKSVMASTPFLSCPPPYNNALIRSLHLSPPPSSSFFAVTMSTTTIPHPHPSFEILGGARDRFLPTLPFLARPYHPFPFLAWNRHIETIFASFFRSTPDVKLRRECLRTQDGGAVALDWVSGDDPSLPPDSPLLILLPGLTGGSGDSYVRHLLARARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMHEVVSHVSARYPEANLYAVGWSLGANILVRYLGQESLNSPISGAVSLCNPFNLVVADEDFRKGFNIVYDKALSKALCKIFKKHALLFEDIGGDYNIPMAANAKSVREFDDGLTRVSFGFKSVDEYYSNSSSSDSIKHVQTPLLCIQAANDPIAPNRGIPREDIKENPNCLLIVTPNGGHLGWVAGDEAPVGAPWTDPLVMDFLQHLENREAVKAPNTSSNKGDKETLYHLQV* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0166 422 PIRSF Ab_hydro_YheT 36 421 IPR012020 -
Lja3g0166 422 ProSitePatterns Uncharacterized protein family UPF0017 signature. 299 340 IPR000952 -
Lja3g0166 422 Gene3D alpha/beta hydrolase 96 397 IPR029058 -
Lja3g0166 422 PANTHER ABHYDROLASE DOMAIN-CONTAINING PROTEIN 30 403 - -
Lja3g0166 422 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN-RELATED 30 403 - -
Lja3g0166 422 MobiDBLite consensus disorder prediction 402 416 - -
Lja3g0166 422 Pfam alpha/beta hydrolase fold 132 370 IPR000073 -
Lja3g0166 422 MobiDBLite consensus disorder prediction 402 422 - -
Lja3g0166 422 SUPERFAMILY alpha/beta-Hydrolases 93 379 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0166 Lja-Chr3 1694045 1697939 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0166 100 397 Miscellaneous Gene Families AT2G03140 32.450 1.39e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0166 - - mtr:MTR_0004s0330 652.129