Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0160 ATGGGTTCAGTACCAGAACTGTTGCCTGAGAAAAGTTGCAGTAAGCTCCTTGGGATTAGGGTCCTACAGCGCTTAAAAGGAAGTCCTGTTTCCTTCAAAACCCACCAAGCCATTGTTTTGATTGTAACATTTTTAGCTTATGCTAGTTATCATGCCACCAGAAAAACTACAAGTATTGTGAAGAGTGTCCTTGATCCTCAATCAAAGGATTTAGGATTGAATTTCTTTTCCTTGAGGCTAACCAATAATGTTTCTGAGTCAACTGGATCAAGGAGAGTTTCTTCAAATCTTGGAGCTGGTTGGGCTCCATTTAATGGACCAGATGGGACATCCATTCTTGGTGAATTGGATGTTGCTTTTCTTGCAGTGTATGCGTTTGGGATGTATTTTTCTGGACATTTCGGTGACCGGTGTAATTTGAGGATTTTTCTAACAGTGGGTATGCTAGGAACTGGATTTTTCACTTCACTATTTGGTATAGGGTACTGGGCAAACATCCACAACTTCTACTACTATCTAATTGTGCAAATGCTTGCTGGATTGTTTCAATCCACTGGATGGCCGTCGGTAGTGGCTGTCGTGGGTAACTGGTTTGGAAAGAGCAAGAGAGGGTTGATCATGGGAATTTGGAATGCTCACACTTCTGTTGGGAACATTGCTGGTTCTTTGATTGCTTCTGCTATGCTGGGATATGGATGGGGTTGGTCCTTTGTTGTGCCGGGACTGATTACCGCTCTCGTTGGTTTGGTGATTTTCCTTATATTGCCGGTGTCGCCCGAGTTAGCTGGAGCTGATAGAGAGGAAGATGATTATAGTTGTCCCAAAAAAGGTGGAGATGAAGTGACAGAGCCTCTGTTAAAGCAAGAAACTCCAGTTGTGGGGGAAGCAGTTGGGTTCCTAGAGGCATGGAAAATTCCTGGGGTTGCTCCTTTTGCCCTTTGTCTGTTCTTTGCAAAGTTGGTTGCATACACATTTCTCTACTGGCTTCCATTCTATGTTAGCCACACAGCAATTGATGGAAAATATCTATCTAGTGAGACATCAGGAACCCTATCCACTTTATTTGATGTCGGAGGAGTGCTGGGAGGAATTCTAGCTGGCCACATTTCTGATCGGTTAGATGCTAGAGCCATAACAGCAGCAAGTTTCATGTACTGTTCAATCCCAGCTCTCTTCTTTTACCGAAGCTATGGACACGTTTCCCTGATCGTAAACGGAGCGCTGATGTTCGTCACGGGCATGTTTGTTAACGGTCCTTACGCTCTCATAACAACCGCGGTTTCGGCTGACCTGGGAACACACAAATCATTGAAGGGAAATTCACGAGCTCTGGCAACCGTCACAGCTATCATCGACGGAACAGGTTCCATAGGGGCTGCAATTGGACCGTTGTTAACCGGTTACATATCTGCAAAGAGTTGGAGTGCAGTTTTCACAATGTTGATGGGAGCAGCTCTAGTTGCAGGGCTGCTTCTAACCCGGCTTGTAATCGCGGAGGTAGCAACAAAGATTGAAGAGTCAAGGTCTAATAGAACACAGGAACCACGTCCACTTGAAGTGTAA 1563 0.4491 MGSVPELLPEKSCSKLLGIRVLQRLKGSPVSFKTHQAIVLIVTFLAYASYHATRKTTSIVKSVLDPQSKDLGLNFFSLRLTNNVSESTGSRRVSSNLGAGWAPFNGPDGTSILGELDVAFLAVYAFGMYFSGHFGDRCNLRIFLTVGMLGTGFFTSLFGIGYWANIHNFYYYLIVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSVGNIAGSLIASAMLGYGWGWSFVVPGLITALVGLVIFLILPVSPELAGADREEDDYSCPKKGGDEVTEPLLKQETPVVGEAVGFLEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAIDGKYLSSETSGTLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCSIPALFFYRSYGHVSLIVNGALMFVTGMFVNGPYALITTAVSADLGTHKSLKGNSRALATVTAIIDGTGSIGAAIGPLLTGYISAKSWSAVFTMLMGAALVAGLLLTRLVIAEVATKIEESRSNRTQEPRPLEV* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0160 520 CDD MFS_SLC37A1_2 36 499 IPR044740 GO:0061513
Lja3g0160 520 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 1 512 - -
Lja3g0160 520 Pfam Major Facilitator Superfamily 113 431 IPR011701 GO:0022857|GO:0055085
Lja3g0160 520 SUPERFAMILY MFS general substrate transporter 39 496 IPR036259 -
Lja3g0160 520 Gene3D MFS general substrate transporter like domains 303 510 IPR036259 -
Lja3g0160 520 Gene3D MFS general substrate transporter like domains 30 268 IPR036259 -
Lja3g0160 520 PANTHER GLYCEROL-3-PHOSPHATE TRANSPORTER 1-RELATED 1 512 - -
Lja3g0160 520 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 501 IPR020846 GO:0022857
Lja3g0160 520 PIRSF Hexose_phosphate_transp 21 514 IPR000849 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0160 Lja-Chr3 1654189 1658027 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0160 1 515 Organic Solute Cotransporters AT3G47420 74.856 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0160 K13783 - gmx:100799211 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0160 3 1654189 1658027 Lja3g0160 3 1654189 1658027 ECH