Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0158 ATGATGATAGATTTGGGTCCGTTCTCGAACGAGAACTTCGATCCCAAGAAATGGATCAACTCAGCGAGTCAAACTCGCCACCCTCAGGAATCGTTGGATAAACACCTCGTCGATCTTGAGATGAAGCTCCAGATGCTCTCTGAGGAAATCGCCTCCTCTCTCGAGGACCAAAGCTCCTCCGCTCTCCTCCGCGTCCCCCGCGCCACTCGCGATGTCATCCGCCTCCGCGACGACGCCGTTTCTCTCCGCTCCGCCGTCTCCGCCATCCTCCTTAAGCTCAAGAAGGCAGAGGGTTCATCAGCTGAATCTATAGCGGCACTTGCGAAAGTAGATGTTGTCAAGCAAAGGATGGAAACTGCTTATGAAACGTTGCAGGATGCTGCTGGATTAACTCAATTGAGTTCGACGGTGGAAGATGTGTTTGCTAGTGGTGATCTCCCTCGCGCGGCGGAAACTCTGGCTAACATGAGGCATTGTTTGTCTGCGGTCGGGGAGGTGGCTGAATTTGCCAACATAAGAAAGCAACTTGAAGTCTTGGAGGATAGGCTAGACATGATGGTGCAGCCTCGTCTTACAGATGCATTATCCAATCGCAAGGTTGATGCTGCTCAAGATTTGCGAGGAATTCTCATAAGAATTGGAAGGTTTAAGTCTCTGGAATCACAATATGCAAAGGTTCATCTGAAACCAATAAAGCAGCTTTGGGAAGATTTTGTGTCAAGGCAACGAGCTAATAAGTCTGCAAATGAGAAGAACGAAATGGAGAGGATATCAAGTGGCGGTGATTTTCATTCAGCTTCACCTACAATATCATTTTCCAGTTGGTTACCAAACTTTTATGACGAGCTACTACTCTATCTTGAACAAGAATGGAAATGGTGTATGGTTGCTTTTCCTGAAGATTATAAAACTCTAGTCCCAAGGCTACTAAGTGAGACCATGGTGGCTATAGGTTCCAGTTTCATATCGCATATCAACCTTGCCATTGGAGAGGCTGTTCCAGAAACAAAAGCACTGGCTAAAGGTATATTTGATATTTTATCTGGAGATATGCAAAAGGGTATTAAGATTCAGACAAAGCATCTGGAGGTCTTGATCGAATTACACAATATGACGGGGACCTTTGCTAGGAATATTCAGCACTTATTTTCTGGTTCTGATGTACGGGTTTTAATGGATGTGCTGAAAGCTGTATACATGCCATATGAATCATTTAAACAGAGGTACGGACAAATGGAGCGTGCCATTCTCTCCTCTGAAATTGCGGGAGTAGATTTAAGAGGAGCTGTAATTAGAGGGGTGGGAGCCCAAGGAGTTGAACTCAGTGAAACGGTTCGCAGAATGGAGGAGTCTATTCCCCAAGTTATCATACTTCTTGAAGCAGCTGCAGAGAGATGCATCAGCTTCACTGGAGGTTCTGAGGCTGATGAGCTAATTCTTGCCCTTGATGACATAATGTTACAATATATTTCCACTTTGCAAGAAACTCTCAAGTCATTAAGAACTGTCTGCGGTGTGGATTATGGTGGTGATACTGTAAAGAAGGAGATGGAAAAGAAGGACGGACACCAAAATGCTCGAAGAGTTGATTTGAGCTCAAGTGAGGAGGAATGGTCCATGGTCCAGGGGGCATTGCAGATCCTTACCGTTGCAGATAGTTTGACAAGCAGATCTTCTGTCTTTGAAGCATCTTTAAGAGCTACTCTCGCTAGATTGAGCACAACTCTATCCTTCTCAGTATTTGGTTCAAGTTTAGACCAAAACCAAACTATAAATGATAATGAAGATGGGGACCTGTCGGTTGGTGGAAGGGCTGCCTTGGATTTGGCAACACTGCGGCTGGTTGATGTGCCTGAGAAAGCCAGGAAGCTTTTTAACCTTTTGAATCAGTCTAAAGATCCCCGATTTCATGCACTCCCCATTGCATCTCAAAGAGTTGCGGCGTTTGCAGACACAGTTAATGAACTTGTATATGATGTCCTCATATCTAAAGTACGACAACGTCTTAGTGATGTGTCTCGTTTACCAATTTGGACATCAGTTGAAGAACAAAGTGCTTTCCCTCTCCCTACCTTCAGTGCATACCCACAGTCCTATGTGACTAGTGTTGGTGAATATCTTCTTACTTTACCCCAACAATTGGAGCCACTTGCAGAGGGAATTAACAGTGAAACCAATGATGAAGCGCAGTTCTTTGCAACTGAATGGATGTTCAAGGTTGCAGAGGGCGCAACAGCACTTTACATAGAGCAATTGCGAGGGATTCAGAACATTTCAGATCGTGGAGCGCAGCAGCTGTCTGTGGATATTGAGTATCTCAGTAATGTGCTTTCCGCTCTGTCAATGCCAATTCCTCCAGTTCTAGCTACATTTCAAACTTGTCTTTCTACATCAAGAGACCAGCTAAAAGATCTTTTGAAGACAGATTCAGGAAACCAACTTGATCTACCAACAGCAAACCTTGTGTGTAAGATGCGGCGAGTGAATTTAGATTCATGA 2499 0.4466 MMIDLGPFSNENFDPKKWINSASQTRHPQESLDKHLVDLEMKLQMLSEEIASSLEDQSSSALLRVPRATRDVIRLRDDAVSLRSAVSAILLKLKKAEGSSAESIAALAKVDVVKQRMETAYETLQDAAGLTQLSSTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVLEDRLDMMVQPRLTDALSNRKVDAAQDLRGILIRIGRFKSLESQYAKVHLKPIKQLWEDFVSRQRANKSANEKNEMERISSGGDFHSASPTISFSSWLPNFYDELLLYLEQEWKWCMVAFPEDYKTLVPRLLSETMVAIGSSFISHINLAIGEAVPETKALAKGIFDILSGDMQKGIKIQTKHLEVLIELHNMTGTFARNIQHLFSGSDVRVLMDVLKAVYMPYESFKQRYGQMERAILSSEIAGVDLRGAVIRGVGAQGVELSETVRRMEESIPQVIILLEAAAERCISFTGGSEADELILALDDIMLQYISTLQETLKSLRTVCGVDYGGDTVKKEMEKKDGHQNARRVDLSSSEEEWSMVQGALQILTVADSLTSRSSVFEASLRATLARLSTTLSFSVFGSSLDQNQTINDNEDGDLSVGGRAALDLATLRLVDVPEKARKLFNLLNQSKDPRFHALPIASQRVAAFADTVNELVYDVLISKVRQRLSDVSRLPIWTSVEEQSAFPLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEGINSETNDEAQFFATEWMFKVAEGATALYIEQLRGIQNISDRGAQQLSVDIEYLSNVLSALSMPIPPVLATFQTCLSTSRDQLKDLLKTDSGNQLDLPTANLVCKMRRVNLDS* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0158 832 Pfam Golgi complex component 7 (COG7) 4 827 IPR019335 GO:0006886|GO:0017119
Lja3g0158 832 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 1 826 IPR019335 GO:0006886|GO:0017119
Lja3g0158 832 Coils Coil 29 56 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0158 K20294 - gmx:100796129 1455.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0158 3 1625094 1631075 Lja3g0158 3 1625094 1631075 ECH