Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0150 ATGGCGCTTAAAACCCTATCCACATTCCTCACACCATTTTCCCTCCCTCCCTCCAAATTCCCCCAACCGTTCACCAAATCTTTCTACATCCTCGGTGAATCCCCGCGCCCTCACAAACCGCGTTTCTCCGCCGCGGAATCCGACGGCACTGGCGCAGCTGCTCCCTCGCCCGGCGAGAAATTCCTCGAACGCCTGCGTTCAATTGAGGCCGCTAATCTCATCCTCAAGGACAACAACAAGAACAGGAAGAAAGAGAAGCCTCTCAAAGCTTCCACTGCCGTCTCTTCCTGCTATGGCTGCGGCGCTCCGTTGCAAACTTCCGACTCCGATGCACCTGGTTATGTCGATCCCCAAACATATCAACTGAAGAAGAGACACCACCAGCTTAGAACAGTACTCTGTAGGAGGTGCAGGCTTTTGTCTCATGGACAGATGATAACTGCTGTTGGAGGACATGGAGGATATTCTGGCGGCAAACAATTTGTTACAGCCGAAGAGCTTCGGGAAAAGTTGTCTCATTTGCGTCGCGTCAAAGCTCTAATTGTCAAATTGGTAGACATTGTTGACTTCAATGGCAGTTTTTTGTCTCGTGTGCGAGATCTTGCTGGTGCTAATCCAATAATATTCGTAGTGACTAAGGTTGATCTCCTTCCAAGAGATACTGATCTTAATTGTATTGGGGACTGGGTTGTAGAGGCTACCACAAAGAAGAAGCTCAATGTTCTCAGTGTCCATTTGACCAGTTCAAAATCATTGGTTGGAATAGCTGGAGTGATATCAGAAATCCAGAAAGAGAAGAAGGCAAGAGATGTGTACATTTTGGGTTCAGCTAATGTTGGGAAATCCGCTTTCATCAATGCTTTACTAAAAACAATGGCTATAAATGATCCAGTGGCCGCAGCTGCACAAAGATACAAACCAATACAATCGGCCGTTCCAGGAACTACCTTAGGGCCAATTCAAATTAATGCTTTCCTCGGTGGAGGGAAACTGTATGACACCCCTGGAGTTCATCTCCACCATAGGCAAACTTCAGTTGTTAATTCTGAAGATCTACCCTCCCTTGCTCCTAAGAGCCGACTGAGGGGCCAATCTTTCCCAAATTCCGAAGTTCTTTCAGACAATGTAGAGGAAGGTGTTTCGACAGTAAATGGCTTGAATGCATTTTCAATATTTTGGGGAGGTCTTGTTAGAATTGATGTCTTGAAGGTTCTCCCAGAAACAAGATTGACTTTTTACGGGCCTAAGAGACTACCAATTCATGTGGTGCCCACAGAAAAAGCAGATGAGTTTTATAAGAAAGAAGTTGGAGTTCTGCTAACCCCACCAATGGGAAGAGAAAATGCTGAAAACTGGAGAGGACTTGACTCTCAACGTAAATTGCAAATAAAATTCGAAGACACAGAAAGGCCAGCTTGTGATATCGCTATATCAGGTCTAGGATGGTTTACTGTTGAGCCGGTTAGTCGGTCACACAAACTGTCACAACCAGAACCAACAGAGAGTGCTGGGGAATTGGTTTTGGCCGTGCATGTCCCTGGACCTGTTGAGATTTTCATGAGGCCACCATTACCAGTTGGCAAGGCTGGTGCAGAGTGGTATCAGTATAGAGAATTAACGGATAAAGAAGAGCAAATGAGGCCAAAATGGTACTTTTGA 1659 0.4587 MALKTLSTFLTPFSLPPSKFPQPFTKSFYILGESPRPHKPRFSAAESDGTGAAAPSPGEKFLERLRSIEAANLILKDNNKNRKKEKPLKASTAVSSCYGCGAPLQTSDSDAPGYVDPQTYQLKKRHHQLRTVLCRRCRLLSHGQMITAVGGHGGYSGGKQFVTAEELREKLSHLRRVKALIVKLVDIVDFNGSFLSRVRDLAGANPIIFVVTKVDLLPRDTDLNCIGDWVVEATTKKKLNVLSVHLTSSKSLVGIAGVISEIQKEKKARDVYILGSANVGKSAFINALLKTMAINDPVAAAAQRYKPIQSAVPGTTLGPIQINAFLGGGKLYDTPGVHLHHRQTSVVNSEDLPSLAPKSRLRGQSFPNSEVLSDNVEEGVSTVNGLNAFSIFWGGLVRIDVLKVLPETRLTFYGPKRLPIHVVPTEKADEFYKKEVGVLLTPPMGRENAENWRGLDSQRKLQIKFEDTERPACDIAISGLGWFTVEPVSRSHKLSQPEPTESAGELVLAVHVPGPVEIFMRPPLPVGKAGAEWYQYRELTDKEEQMRPKWYF* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0150 552 Pfam 50S ribosome-binding GTPase 271 342 IPR006073 GO:0005525
Lja3g0150 552 CDD YqeH 134 337 - -
Lja3g0150 552 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 341 IPR027417 -
Lja3g0150 552 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 164 340 IPR030378 GO:0005525
Lja3g0150 552 Gene3D - 165 341 IPR027417 -
Lja3g0150 552 PANTHER NO-ASSOCIATED PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL 38 552 IPR044229 GO:0003924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0150 K13427 - gmx:100798614 897.501