Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0138 ATGAATCAATCAGACATGAACCTGAACTATCTATGGCCTCATCAAGTTACAGAGAATACACGAAGATCTGCAAATTATCAACCCAATATTTGGAGTGACACCTTTCTGCAGTCACTTGCCAGCAAATATAATAAAAAAAAATTTGATATGCACTTAAAGAAACGGGTAATAAAAGTAAGGGGTCTTTTTGCTCAAGAGATGGATGTTTTGCAAAGACTAGAGTTGGTTGATTGGATCCAAAGACTAGGCCTTGCCAACTACTTTCAGAAGGAAATCAATGATGCTCTTGTCTCTACAAAAAACAGCAACAATTTCGGTACCCAAGATAATTTGCATGGATCTGCACTGTGCTTCAGGCTTCTAAGGCAGCATGGATACAAAGTTTTACCGGCCAATATGCTAGGCAACTTCTTAGATGAAAAGGAAATAGTGAAGAAGAAAAGTTCATTTGCTGATCATGGTAAAGATGTTATGGAGCTTCTTGAGGCCTCACATTTGTGGTTAGAAGGAGAAAATATCTTGGATGGGGGTGGGGCCAAAAAATTTGCAACAAATTGGATTAAGGATGCTTCCTCTCTGTCCATCAATATCAACGATATTGTTGAAAGAGTGGTCCATGCTTTGGAGCTTCCATCCCATTGGAGAGTCTCATGGTTTGATGTCAAATGGCATGTTAGGCAATACCAAAAGGAGAAACATATGGACCCCATTTTGCTTGAATTGTCTAAATTAAACTTCAACATAATTCAGGCCAAACTTCAAAAGGAGGTTAGAGAACTGTCAAGGTGGTGGGAGAATCTTGACCTCCAAAAAGACTTGAGCTTTGCAAGAAATAGGTTGGTTGAAAGCTTCATGTGTGCAGCAGGAGTTGCATTTGAGCCCAAGAATAAATCCATAAGGAATTGGCTCACTAAAGTAATTATTTTCATCCTAGTGATTGATGATATTTATGACATACACGCCTTATTTGGAGAACTGGAGCTGTTCACAATGGCATTTGATAGATGGGATGCCAAAGAACTTGACGAACTTCCTGATTACATGAGGATTTGTTTCAATTCACTAAAAGATGTCACAAATGAAATTGCTTATGAGATTGCCGGAGAAAAGAACTTTGATATGGTGTTAGCTTACCTAAAGAAAGCGTGGAGAGACTTCTGCAATGCATTATACACGGAAGCAAAGTGGTACAGAATGGGATACATTCCATCATTGCAAGAATATCTCAGCAATGCTTGGATTTCTTCTTCGGGTCCAGTAATTCTCCTCCATTCATATTTTGCTACAATGCATGAAGTAGCCGATGACATTGACAATTTTCTACACACATATGAAGATTTGATCTACAATGTATCTCTTGTAATTCGACTATGCAATGATTTAGCTACTTCAGTGGCTGAAAAGGAAAGGGGTGATGCTGCCTCGGCTATTTTGTGCTACATGAATCAAATGGGTGCTTCAGAGGAAGAAGCAAGAAAACATATCCACAACACCATAAACAATGCATGGAAAAGGATAAATGGGCATTGCTTCACACAAGATGCTTCAGTGGAGCCATTTCTTACTCAAGCCCAAAATGCTGCTAGAGTGGCCCATACCCTTTATCTAAATGGTGATGGGTTTGGCATTCAGGACAGAGACATTAAAAAGCACATTTTATCACTGCTTGTTGAACCCTTGTAG 1683 0.3916 MNQSDMNLNYLWPHQVTENTRRSANYQPNIWSDTFLQSLASKYNKKKFDMHLKKRVIKVRGLFAQEMDVLQRLELVDWIQRLGLANYFQKEINDALVSTKNSNNFGTQDNLHGSALCFRLLRQHGYKVLPANMLGNFLDEKEIVKKKSSFADHGKDVMELLEASHLWLEGENILDGGGAKKFATNWIKDASSLSININDIVERVVHALELPSHWRVSWFDVKWHVRQYQKEKHMDPILLELSKLNFNIIQAKLQKEVRELSRWWENLDLQKDLSFARNRLVESFMCAAGVAFEPKNKSIRNWLTKVIIFILVIDDIYDIHALFGELELFTMAFDRWDAKELDELPDYMRICFNSLKDVTNEIAYEIAGEKNFDMVLAYLKKAWRDFCNALYTEAKWYRMGYIPSLQEYLSNAWISSSGPVILLHSYFATMHEVADDIDNFLHTYEDLIYNVSLVIRLCNDLATSVAEKERGDAASAILCYMNQMGASEEEARKHIHNTINNAWKRINGHCFTQDASVEPFLTQAQNAARVAHTLYLNGDGFGIQDRDIKKHILSLLVEPL* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0138 560 Pfam Terpene synthase, N-terminal domain 30 208 IPR001906 GO:0010333|GO:0016829
Lja3g0138 560 Pfam Terpene synthase family, metal binding domain 239 504 IPR005630 GO:0000287|GO:0010333|GO:0016829
Lja3g0138 560 Gene3D Farnesyl Diphosphate Synthase 28 550 IPR008949 -
Lja3g0138 560 PANTHER OS04G0344100 PROTEIN-RELATED 20 560 - -
Lja3g0138 560 SUPERFAMILY Terpenoid synthases 234 560 IPR008949 -
Lja3g0138 560 PANTHER ALPHA-FARNESENE SYNTHASE 20 560 - -
Lja3g0138 560 SFLD Terpene Cyclase Like 1 C Terminal Domain 236 559 IPR034741 -
Lja3g0138 560 SFLD Isoprenoid Synthase Type I 236 559 - -
Lja3g0138 560 CDD Terpene_cyclase_plant_C1 21 559 IPR044814 GO:0010333|GO:0016102
Lja3g0138 560 Gene3D - 67 234 IPR036965 GO:0010333|GO:0016829
Lja3g0138 560 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 27 233 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0138 Lja-Chr3 1432338 1440351 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0138 K14173 - gmx:100812119 783.482