Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0136 ATGAGAACGCTATGTAGGTCCTTTCGCTCCATGAAACGCCCAATTCCAAACCCTAATTTATCGAAATCATCATCGTCTCCTTCAAAACCAAAATCAGATTCATGGTGTGTTTATCTCATCCTCTCCACCAACCATCCCATCAAAACCTACGTAGGAGTCACCACCAATTTCCCTCGCCGTTTGAAGCAGCATAATGGTCAACTTATAGGGGGTGCAAAAGCATCCCGGGCTGGAAGGCCGTGGATTTGTGCATGCGTCATTTGTGGTTTCACTAACCGAAGTGAAGCCTGTGCATTTGAATCAAAATGGAAAGTTTTCTCAAGAAGATCTCCCCGCAAAAATCACAATGACAATCTCTCCAAGCAAAGTGAAGATCCATCACTTCCACTGCTGCGGCACAGGCAAGCAGCTTTAAATAAAGTGAAAGGTTCACTCGACTGCACTCACTTAGAAATTAACTGGCATTTGGAGCCATCGTGA 480 0.4479 MRTLCRSFRSMKRPIPNPNLSKSSSSPSKPKSDSWCVYLILSTNHPIKTYVGVTTNFPRRLKQHNGQLIGGAKASRAGRPWICACVICGFTNRSEACAFESKWKVFSRRSPRKNHNDNLSKQSEDPSLPLLRHRQAALNKVKGSLDCTHLEINWHLEPS* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0136 159 Gene3D - 29 129 IPR035901 -
Lja3g0136 159 PANTHER EMB|CAB76036.1 19 158 - -
Lja3g0136 159 MobiDBLite consensus disorder prediction 14 31 - -
Lja3g0136 159 PANTHER STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1 19 158 - -
Lja3g0136 159 MobiDBLite consensus disorder prediction 11 31 - -
Lja3g0136 159 ProSiteProfiles GIY-YIG domain profile. 33 115 IPR000305 -
Lja3g0136 159 Pfam GIY-YIG catalytic domain 35 105 IPR000305 -
Lja3g0136 159 SUPERFAMILY GIY-YIG endonuclease 34 107 IPR035901 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0136 K15078 - gmx:100805152 251.906