Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0114 ATGTCTCTAGTTAGGCTCTTATTGCCATTTTTATTCTTGTTACTTAAGGCATCTGTTGATAACAGCAATGCTCAAGGTGTTGATTGCTTAGCTTCTAATCGAGAAGCTCTCATAGACTTCAAGAATGGCCTTGAAGATCCTTTCAACCGACTCTCTTCGTGGAGGAACTGGAACACCAACTGTTGTCAATGGCACGGCATACATTGTGACAACATCACAGGTGCAGTTGTTGCTATTGATCTTGGGAACCCACATCCACATCCAGTGTTTGGTGAGTCTCCTCCTGGGAGGTATGGATTCTGGAACCTGAGTGGTGAGATTAGACCATCTTTGATGAAGCTCAAGTCACTAAGGCATTTAGACTTGAGTTTAAACACATTCGGGGGCATACCGATACCAGCATTCTTTGGATCACTGGTGAATTTGCAATATTTGAACTTGTCAAATGCTGGTTTTGGTGGTATAGTTCCTCCCAACTTGGGAAACCTTTCTCACTTGCTATCTCTTGATCTACAGCATTTGAGCTTGCATGTTGAAAATCTACAATTGGTGGCTGGCCTTAACTCTTTGAAACATCTTGCAATGAATGGAGTTGGCCTCTCACCGGTAGGAATAGACTGGGTCAGTGGATTAAACCAGCTTCAATCTTTGATTGAATTGCATCTACATTCTTGTAAGCTGTCTGGTTTTATTCCATCTCTCAATTTCACTTCACTTGCTGTTCTGGATCTTGGTTATAATAGCTTTGTTTCAAAGATACCCGATTGGCTTGTTAATATCAGTAGCATACAACATATTGACATAAGCTATAGTAACATGAATGGAAGCATACCTATTGGTTTAGGAGACCTGCCAAATTTGTTGTCCTTAAATTTGAAAGGGAACCAAGATCTTACAGCAAACTGCTCACAACTCTTCAGGGGAAAATGGGAGAAGATACAAAGGCTTGATTTTGCAATTAATAAAATGAAAGGGAAAATTTCTCCATCCATTGAAAACATGACTTCTCTCATTTACCTTGACCTTTCTTTTAATGCCATTGAGGGTGTTATTCCAGGTTCCATCGGTAAACTCTGCAACTTGAATACTATTGATTTATCTGCAAACATGATGGCAGGAAGTCTGCCTGAATTTCTTCAAGGAACAGATAGCTGTCCTATTCCCAGTTCAATAGGATCATTGCAAAAACTTACATACTTGGGACTTGACAGAAATAAACTAAATGGGACTCTCCCTGATAGCATGATCACTGAAGCCCATTTTATAAAGACAAGTAAGTTAAAATCATTAGACTTGTCTTTCAATTCATTCAAGGTGAATGTCAGTTCCAATTGGGTCCCTCCATTCCAACTCAGGTCTCTTAAGATGAGTTCATGTGCTTTGGGCCCCTTATTTCCAGCTTGGCTGAAATCACAAAAAGATGGGCCGCTTCCAAATCCAATATCTGCGGCATTTGCATCGGTTCTTGAGGTTGATCTAAGCTATAATCTTCTTGAAGGACCAATTCCTGTTACAAACACAGTACTTGGGATTTGTTGGAGAAATACCATTGTTTACAAGAGATATGCTCTCTCAAATAACAACTTACCTGGAATTATCCCTCCAAGCCTTGCAAATTGTTCTTTTCTGGATGTACTAGACCTTGGTAGCAACAATCTGATTGGGACAATTCCAAGTTCTCTGGGTCAATTACAACTACTGAGATCACTACACCTTAGTGACAATAGCTTTCGGGGGCACTTGCCATTGTCTTTGAGAAATTTGTCCAATTTGGAAACCATGGATCTTGGAAATAATGAATTTTCAGGTATTATTCCACCTTGGTTTGGGGAAGGCATTTCATATCTAAGAATTCTGAATTTGAGATCTAATTCACTTTCTGGAGAATTGCCTTCTGAGCTTTCAAAACTAAGATCATTGCAAGTCTTTGACCTTGCTAGAAATAACTTGAGTGGCAGCATTCCAGCTAGCTTGGGTGATCTGAAAGCAATAGCTGAACAGGAAAAGAATAACACATACTCACGGTATGGACAAACGACAACTTATTATTACTATGACGAAAACTTGGTTGTGTATGCAAAAGGACAACGTCTAGTGTATACCAGAACTCTTTCCCTTGTTACTAGCATAGACCTTTCTGATAACAACTTCACTGGAAATCTTCCCCATGAAATAACCAAGCTATCTGGTTTGGTGGTTCTCAATTTCTATCATCTCTTGAGTCTTGATCTCTCAACTAATCGACTTTCCGGCACAATCCCTTCAGGCTTGTCTTCCTTGTCATTTCTGGGATTCCTGAATTTGTCTAACAACAACCTTGTAGGTGCCATTCCTTATACAGGTCACATGACAACCTTTGATACATCAACTTTTACTGGGAATCCTGGTCTCTGTGGTCCCCCCCTTCCTGTGAAGTGTCCGGGTGATGATGATCATGATCCTAGTCATGATGATGCTGTAAATGATGATGGATTGATTGATGGCTGGTCTTACTTGAGTCTTGGTTTGGGTTTTGCAGCAGGCATTCTGATTCCTAGTTTCATTTTAACAATGAAGGGATCTTGGGGTTATGCCTATTTTTATTTTCTTGATCAAGTTGTTGACAAATTATTGAGGCTGTCACATAAATAA 2631 0.3983 MSLVRLLLPFLFLLLKASVDNSNAQGVDCLASNREALIDFKNGLEDPFNRLSSWRNWNTNCCQWHGIHCDNITGAVVAIDLGNPHPHPVFGESPPGRYGFWNLSGEIRPSLMKLKSLRHLDLSLNTFGGIPIPAFFGSLVNLQYLNLSNAGFGGIVPPNLGNLSHLLSLDLQHLSLHVENLQLVAGLNSLKHLAMNGVGLSPVGIDWVSGLNQLQSLIELHLHSCKLSGFIPSLNFTSLAVLDLGYNSFVSKIPDWLVNISSIQHIDISYSNMNGSIPIGLGDLPNLLSLNLKGNQDLTANCSQLFRGKWEKIQRLDFAINKMKGKISPSIENMTSLIYLDLSFNAIEGVIPGSIGKLCNLNTIDLSANMMAGSLPEFLQGTDSCPIPSSIGSLQKLTYLGLDRNKLNGTLPDSMITEAHFIKTSKLKSLDLSFNSFKVNVSSNWVPPFQLRSLKMSSCALGPLFPAWLKSQKDGPLPNPISAAFASVLEVDLSYNLLEGPIPVTNTVLGICWRNTIVYKRYALSNNNLPGIIPPSLANCSFLDVLDLGSNNLIGTIPSSLGQLQLLRSLHLSDNSFRGHLPLSLRNLSNLETMDLGNNEFSGIIPPWFGEGISYLRILNLRSNSLSGELPSELSKLRSLQVFDLARNNLSGSIPASLGDLKAIAEQEKNNTYSRYGQTTTYYYYDENLVVYAKGQRLVYTRTLSLVTSIDLSDNNFTGNLPHEITKLSGLVVLNFYHLLSLDLSTNRLSGTIPSGLSSLSFLGFLNLSNNNLVGAIPYTGHMTTFDTSTFTGNPGLCGPPLPVKCPGDDDHDPSHDDAVNDDGLIDGWSYLSLGLGFAAGILIPSFILTMKGSWGYAYFYFLDQVVDKLLRLSHK* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0114 876 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 385 474 - -
Lja3g0114 876 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 4 370 - -
Lja3g0114 876 Gene3D Ribonuclease Inhibitor 30 204 IPR032675 -
Lja3g0114 876 SUPERFAMILY RNI-like 235 499 - -
Lja3g0114 876 SMART LRR_typ_2 637 661 IPR003591 -
Lja3g0114 876 SMART LRR_typ_2 588 612 IPR003591 -
Lja3g0114 876 SMART LRR_typ_2 736 760 IPR003591 -
Lja3g0114 876 SMART LRR_typ_2 394 418 IPR003591 -
Lja3g0114 876 SMART LRR_typ_2 114 137 IPR003591 -
Lja3g0114 876 SMART LRR_typ_2 334 357 IPR003591 -
Lja3g0114 876 SMART LRR_typ_2 284 308 IPR003591 -
Lja3g0114 876 SMART LRR_typ_2 358 381 IPR003591 -
Lja3g0114 876 SMART LRR_typ_2 139 163 IPR003591 -
Lja3g0114 876 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 475 871 - -
Lja3g0114 876 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Lja3g0114 876 Gene3D Ribonuclease Inhibitor 302 384 IPR032675 -
Lja3g0114 876 PANTHER - 4 370 - -
Lja3g0114 876 Gene3D Ribonuclease Inhibitor 205 301 IPR032675 -
Lja3g0114 876 PANTHER - 385 474 - -
Lja3g0114 876 PANTHER - 475 871 - -
Lja3g0114 876 Pfam Leucine Rich Repeat 616 637 IPR001611 GO:0005515
Lja3g0114 876 Pfam Leucine Rich Repeat 590 610 IPR001611 GO:0005515
Lja3g0114 876 SUPERFAMILY L domain-like 29 299 - -
Lja3g0114 876 Pfam Leucine rich repeat 238 296 IPR001611 GO:0005515
Lja3g0114 876 SUPERFAMILY L domain-like 524 803 - -
Lja3g0114 876 Gene3D Ribonuclease Inhibitor 473 809 IPR032675 -
Lja3g0114 876 Gene3D Ribonuclease Inhibitor 385 472 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0114 Lja-Chr3 1227123 1235634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0114 29 808 Receptor kinase-like Gene Family AT4G13920 29.480 3.46e-76 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0114 - - ahf:112732706 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0114 3 1227123 1235634 Lja3g0114 3 1227123 1235634 ECH