Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0093 ATGGCATTTCACCTCGCATGTCCAATTACATGTCGCCGAATCTGCTTCTGTTCGTTAGGGTTTCCGCGCTCTCTTCCCGACGCGAATGCTTTTCTCAACGACGTCGCTTTGCTCACCGACTTCATTTCCGCCGGAACCACCGCCAATGATGCCACCGCCACCGTCCAGGTCGCTGTCCCCAAGGTTGTGCCGCCACCGCCTGAAGCTCTCCCCGTTGCTGGTGGTGACGCGCTTGATGAATCCGCCTCCATGAAGGCCAAGCGCGTCGCGCTCCAGCGTAAGGGCGCCGCCGCTATGATCGCCGCTGAGGAGTACGCTCGCCGCTTTGAGTCCGGCGATGTCCTGGATACGCCGGGGAGTGTTACTGGAGAAGAACTGGGACAATCCAATGTGAAGGTCTTTTGTCGGATGTGCAATCGTGTTGAGAATGAAGGGAGTGAGAGGGCGAAGAAGATGCTGTCTTGTAAGAGCTGTAGTAAGAAATACCATAGGACCTGCTTGAAAAGTTGGGCTCAAAATAGAGATTTATTTCATTGGAGTTCGTGGACTTGTCGTGCTTGCCGAATTTGCGAGGCATGCAGAAGGACTGGTGATCCCAGTAAGTTCATGTTTTGCAAAAGGTGTGATGGTGCTTACCATTGTTATTGTCTGCAACCTCCTCACAAGAATGTTAGTGCCGGACCCTATTTATGCCCAAAACACACAAAGTGTCACAGTTGCGGATCCAATGTCCCTGGAAATGGACTTAGCGTGAGGTGGTTCCTGGGATACACCTGCTGTGATGCTTGTGGAAGATTATTTGTGAAAGGGAACTACTGTCCTGTTTGTTTGAAGGTTTACAGAGATTCAGAATCAACACCAATGGTTTGCTGCGATGTTTGCCAGCGCTGGGTACATTGCCAGTGTGATAATATTAGTGATGAAAAATATCACCATTTTCAAGTGGATGGGAATCTGCAGTATACATGTCCCACTTGTCGTGGGGAATGTTATCAGGTCAAGGGTCTTGAGGATGCTGTTCAAGAGCTTTGGAGGAGAAAGAACATTGCTGATAAAGATTTGATTACCAGCTTGAGGGCTGCTGCTGGTTTACCAACACAAGAAGAAATATTTTGTATTTCACCATATTCTGATGATGATGATAGTGGGCCTCCGAAAATAAAGAGTGAATCTGCGCGTTCCTTTAAGTTCTCTCTAAAGAATTATTCATCCAATAACTCACCTATGAAGATGAAAGATTATGGGAAGAAATCTTCAAGCAAAAAGACTGCTAAGAAAAAGGATTCTCAGTCAATGTTGACTGGTAAAATTGACAATAGTTTTGAAGGACATAGTGATGTTAAATCTTTACATAGCTTGGATGATGATAAGTATGATGACATACAATCTCTGAGAAATGAAGGTCCTGATGTTTATTCATCACCTGCTACTGGAAGCCTGAGTCAAACTGAAGCATCTTGCCCTATCAATCAGCCAGGGATTTTGAAACGTAAGTTTGTTGATGAGGTGATGGTCAGTGATGAAGAAAGGAAGCCCAGAGTTGTTCGTATTAAAAGCAATAAGGCACATACTTTGAATAGTGAAGAGGAAAGTAGAAAGCATGGTGATAAGACTCAAAATGTGAAAGGGAAGAAGTTGGTTATAAATTTGGGAGCGCGGAAGATTAATGTGGCTAGTTCTCCACGGTCTGATAATTCAAGCTGCCAAAGAGATCAAGATCTGGTTACTGTTAATGGAAATGAAAATATAAGCCATTTGAGGAAAGGAGACAAGTATGCATTAGATAGACCCGATGGGACAGGAATACTTGTTGATGGCAAAGGTAACAGAGTTGATTCTGGCCAATCAAAAATTTCAAAGGCTTCAGGGAGAGAGGGGAATTTTATTAAGCTGGGAAAAGTTAAGCCTGGTGCTTCTCAATTTAACTTGACCCCTAGTAGAGGCAAAATGTCTGATGGGGGTGAAATTGTTCCTTTAGAGCGTTCTCTCATCTCGAGGGGAAAACGTTGCACTGATGGAATTACTGGTCAAGTTGGAAAAGAGGCTACATCAAGAGGTGAAAGGACGTATTTGGGCAAGCAGTCAGAAGGCAGCTCTGATGCATACGATGAAGTAGATGACAATAACAATCAGACCCTGGCACGTTCTTTACCAAAAGATTGTAAACCTTTACTGAGATTTAAATTAAAGAAACCTAGCATGGAAAGTCAAAATTCTCATCAGGAGGAGGAAAAGACTACAATCAAGGGCCAGAGGTCAAAAAGGAAGAGACCTTCACCTTTTAAGGAAAAAATATCATTTAATGGGTCTGACGATACAAGTCAATCACATCAAGACCGTGTAATGGATGAGATCATGGATGCCAACTGGATATTGATGAAGCTGGGTAATGATGCAGTTGGAAAGAGAGTTGAAGTTCATCAGGCATCTGACAATACTTGGCACAAAGGAGTAGTTACTGAAGTAGTTGAAGGCACTTCAAAGTTGCATGTTACCTTAGATGAAGGTAGGGTGGATATCTGCGATCTCAAAAAGCAGGGGGTTCGTTTTGTTCCTCATAAGCAAAAGAGATCAAAGACATGA 2583 0.4379 MAFHLACPITCRRICFCSLGFPRSLPDANAFLNDVALLTDFISAGTTANDATATVQVAVPKVVPPPPEALPVAGGDALDESASMKAKRVALQRKGAAAMIAAEEYARRFESGDVLDTPGSVTGEELGQSNVKVFCRMCNRVENEGSERAKKMLSCKSCSKKYHRTCLKSWAQNRDLFHWSSWTCRACRICEACRRTGDPSKFMFCKRCDGAYHCYCLQPPHKNVSAGPYLCPKHTKCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDNISDEKYHHFQVDGNLQYTCPTCRGECYQVKGLEDAVQELWRRKNIADKDLITSLRAAAGLPTQEEIFCISPYSDDDDSGPPKIKSESARSFKFSLKNYSSNNSPMKMKDYGKKSSSKKTAKKKDSQSMLTGKIDNSFEGHSDVKSLHSLDDDKYDDIQSLRNEGPDVYSSPATGSLSQTEASCPINQPGILKRKFVDEVMVSDEERKPRVVRIKSNKAHTLNSEEESRKHGDKTQNVKGKKLVINLGARKINVASSPRSDNSSCQRDQDLVTVNGNENISHLRKGDKYALDRPDGTGILVDGKGNRVDSGQSKISKASGREGNFIKLGKVKPGASQFNLTPSRGKMSDGGEIVPLERSLISRGKRCTDGITGQVGKEATSRGERTYLGKQSEGSSDAYDEVDDNNNQTLARSLPKDCKPLLRFKLKKPSMESQNSHQEEEKTTIKGQRSKRKRPSPFKEKISFNGSDDTSQSHQDRVMDEIMDANWILMKLGNDAVGKRVEVHQASDNTWHKGVVTEVVEGTSKLHVTLDEGRVDICDLKKQGVRFVPHKQKRSKT* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0093 860 PANTHER HISTONE ACETYLTRANSFERASE 2 854 - -
Lja3g0093 860 MobiDBLite consensus disorder prediction 441 464 - -
Lja3g0093 860 MobiDBLite consensus disorder prediction 520 542 - -
Lja3g0093 860 ProSitePatterns Zinc finger PHD-type signature. 135 187 IPR019786 -
Lja3g0093 860 ProSiteProfiles Zinc finger PHD-type profile. 270 329 IPR019787 -
Lja3g0093 860 PANTHER PHD FINGER FAMILY PROTEIN 2 854 - -
Lja3g0093 860 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 267 329 IPR013083 -
Lja3g0093 860 SUPERFAMILY FYVE/PHD zinc finger 270 328 IPR011011 -
Lja3g0093 860 MobiDBLite consensus disorder prediction 522 541 - -
Lja3g0093 860 MobiDBLite consensus disorder prediction 596 624 - -
Lja3g0093 860 ProSiteProfiles Zinc finger PHD-type profile. 132 190 IPR019787 -
Lja3g0093 860 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 127 244 IPR013083 -
Lja3g0093 860 MobiDBLite consensus disorder prediction 670 706 - -
Lja3g0093 860 MobiDBLite consensus disorder prediction 729 777 - -
Lja3g0093 860 MobiDBLite consensus disorder prediction 729 750 - -
Lja3g0093 860 SUPERFAMILY FYVE/PHD zinc finger 127 188 IPR011011 -
Lja3g0093 860 MobiDBLite consensus disorder prediction 403 488 - -
Lja3g0093 860 MobiDBLite consensus disorder prediction 414 432 - -
Lja3g0093 860 SMART PHD_3 189 235 IPR001965 -
Lja3g0093 860 SMART PHD_3 134 188 IPR001965 -
Lja3g0093 860 SMART PHD_3 272 327 IPR001965 -
Lja3g0093 860 MobiDBLite consensus disorder prediction 467 488 - -
Lja3g0093 860 SUPERFAMILY FYVE/PHD zinc finger 179 240 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0093 Lja-Chr3 1009508 1015934 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0093 - - mtr:MTR_4g037745 1297.72