Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0090 ATGATGAAGTTTTCAGGATATTCCCTAGCGGTTTCATTTTCTCCTGTAGGTTCCACTGTCATTAGAAACAATTGCAGATTCCATGTTGGTAGGAATTTCCGTAGCAGCTCAAGGTTCTTTTCTGCGAAACAACAATCACATGATAAAGGAGTGCTTCCAAATTACTATCTTCCTCCTTGGTTTAGTGTTGCTCCAATGATGGAGTGGACAGATCATCACTATAGGACTCTAGCGCGCCTCATATCAAAACATGCTTGGCTCTACACGGAGATGCTTGCAGCTGAGACAATTGTCTATCAACAGGACAATCTGGACAGGTTCTTGGCATTTTCTCCTGACCAACATCCCATCGTGCTTCAAATTGGAGGGAGTAATGTAGAAAAATTGGCAAAAGCAACTGAACTTGCTAATGCCTATGGCTATGATGAGATCAACTTAAACTGCGGATGCCCTAGTCCCAAAGTAGCTGGACATGGGTGCTTTGGTGTGAGTCTTATGCTTGACCCAAAGTTTGTTGCTGAGGCTATGTCAGCCATTGCTGCCAATACAAATGTACCTGTTAGTGTCAAATGTCGAATTGGTGTGGACGATCATGACTCTTATGATGAGCTGTGTGATTTCATATTCAAGGTTTCTTCTCTATCACCCACTAAGCACTTCATAATTCACTCAAGGAAGGCATTGCTCAATGGCATTAGCCCTGCTGAAAATAGGAGTATTCCTCCACTAAAATATGAATACTTTTATGGCCTCTTACGTGACTTTCCCGATTTAACATTTACAATAAACGGTGGCATTACTAGTGTTGACGAGGTTTATGCAGCTCGAGAAGCTGGGGCTTATGGTGTTATGGTTGGACGTGCAGCATACAATAACCCTTGGCATATTTTGGGACATGTTGATACTGTAATTTACGGTGCACCAAGCTGTAGTCTTACACGTCGTCAGGTCCTTGAAAAATATATCGTCTACGGGGACTCGGTGTTGGGAAAATATGGACATAGGCCAACTGTGCGAGATATTGTGAAGCCTTTACTCAATCTTTTCCATTCAGCGCCCGGGAATGGACTTTGGAAGCGCAAAGCAGATGCTGCTTTCCGACATTGCACGACAATAAAATCATTTTTTGAAGAAACCCTTGTAGCAATTCCTGACTCTGTGTTGGATTCGCCTGTTGTGGAACCAACTCCTGGCCGCAGAGATCTTTTTGCAAATATGGACAGTTTACTGCCTCCTCCATACACGACAAGAGAAGAGGCTGTTATTATATGCGCTTAG 1278 0.4319 MMKFSGYSLAVSFSPVGSTVIRNNCRFHVGRNFRSSSRFFSAKQQSHDKGVLPNYYLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGHRPTVRDIVKPLLNLFHSAPGNGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGRRDLFANMDSLLPPPYTTREEAVIICA* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0090 425 SUPERFAMILY FMN-linked oxidoreductases 60 360 - -
Lja3g0090 425 Gene3D - 309 372 - -
Lja3g0090 425 PANTHER TRNA-DIHYDROURIDINE SYNTHASE 54 422 - -
Lja3g0090 425 CDD DUS_like_FMN 61 294 IPR035587 -
Lja3g0090 425 Pfam Dihydrouridine synthase (Dus) 63 371 IPR035587 -
Lja3g0090 425 Gene3D Aldolase class I 57 300 IPR013785 -
Lja3g0090 425 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 54 422 IPR004653 GO:0002943|GO:0017150
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0090 Lja-Chr3 978067 981728 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0090 K05539 - gmx:100779457 734.176