Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0089 ATGGCATCAGTCACCATGGCAGCATCCTTCCTCAGCAGCTCAGCCATCGCCAACCGGTCTCCCGTGGCTTCCCGGCGGAGCCTCGTGGTGGTAGCCAATGCTGCCAGAACAGTTGATGGAGAAAAAATGAAGGTGAGTTATGACAATGACAAGGAGGGAAGGAGGAACATCATGTTTGCTGCTGCAGCAGCAGCTGTTTGCTCTGTTGCTGGGATGGCTGTGGCTGATGAGCCCAAACGTGGCTCCCCAGAAGCTAAGAAAGCCTATGCTCCTGTTTGTGTCACCAATCCAACAGCTAGAATTTGCCGCAACTAA 315 0.5333 MASVTMAASFLSSSAIANRSPVASRRSLVVVANAARTVDGEKMKVSYDNDKEGRRNIMFAAAAAAVCSVAGMAVADEPKRGSPEAKKAYAPVCVTNPTARICRN* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0089 104 PANTHER PHOTOSYSTEM II 5 KDA PROTEIN, CHLOROPLASTIC 1 104 IPR040296 -
Lja3g0089 104 PANTHER PHOTOSYSTEM II 5 KDA PROTEIN, CHLOROPLASTIC 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0089 Lja-Chr3 976214 977143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0089 - - adu:107477533 136.732