Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0083 ATGGGTAGAACTCTTCATCTGGGTTTTTTATTAGCACTCTCTTTGGTTTTGATTCTGAATGTGGCTCATGGAGGCAAAACTAGCACCTTCGTTAGGAAAGTTGAGAAGACTGTGGATATGCCATTTGATAGTGATGTTTTTGCTGTCCCTCCTGGTTATAATGCTCCCCAACAGGTTCATATAACACAAGGTGACCTTGAGGGGAAAGCCTTGATCGTGTCATGGGTGACTGTAGATGAACCCGGGTCGAGTGAAGTGCATTACTGGAGTGAACACAGCAAGGAAAAGAAGAAAGCTGATGGAAAAGTTGTTACTTATAGATTCTTCAATTACACATCTGGTTTTATTCATCACACCACCATCAGACAATTGAAGCATAACACCAAATATCACTATGAGATTGGAATCGGGAACACAACGCGGCAGTTTTGGTTTATAACTCCTCCTGAAGTTGGTCCTGATGTGCCATACACATTTGGTCTTATAGGGGATCTTGGTCAGAGTTATGATTCAAATAAGACCCTTACTCACTATGAAACGAACCCAAAAAACGGACAAACTGTGCTGTTTGTAGGAGACCTCTCTTACGCGGATAACTACCCAAATCATGATAATAATAGGTGGGATTCTTGGGGAAGGTTTGTAGAAAGGAGCGTTGCTTATCAACCATGGATATGGACTGCAGGGAACCATGAACTTGATTTTGCTCCAGAAATTGGTGAAACCAAACCTTTCAAGCCTTATACCCGCCGTTACCCTGTTCCTTATAAAGCATCAGGGAGTACTCAACCCTTCTGGTATTCTATCAAGAGAGCTTCAGCATACATCATTGTCTTGTCTTCATATTCAGCATATGGAAAATACACACCCCAATACAAATGGCTTGAACAGGAGCTACCGAAAGTTAACAGGACAGAGACTCCTTGGTTGATTGTTCTCGTGCATTCACCTTGGTATAACAGCTACAATTATCATTTTCTGGAAGGGGAAACAATGAGGGTAATGTTTGAGCCCTGGTTTGTGAAGTACAAGGTTGATGTTGTGTTTGCTGGTCATGTTCATGCCTATGAACGTTCTGTAAGTGCTAACACTTGGCTTGTTAACATGACATATCCCCAGCCAGAGTACTCTGCATTCCGAGAAGCCAGCTTTGGACATGCCACTTTCGACATAAAGAACCGAACTCATGCTCACTATGGCTGGCATAGGAATCAAGATGGAGATGCTGTACAGGCTGATTCCCTTTGGTTTTTCAACAGATTCTGGCACCCAGTTGATGATTCCACAACTCCCGTTTCCCATTAA 1305 0.4268 MGRTLHLGFLLALSLVLILNVAHGGKTSTFVRKVEKTVDMPFDSDVFAVPPGYNAPQQVHITQGDLEGKALIVSWVTVDEPGSSEVHYWSEHSKEKKKADGKVVTYRFFNYTSGFIHHTTIRQLKHNTKYHYEIGIGNTTRQFWFITPPEVGPDVPYTFGLIGDLGQSYDSNKTLTHYETNPKNGQTVLFVGDLSYADNYPNHDNNRWDSWGRFVERSVAYQPWIWTAGNHELDFAPEIGETKPFKPYTRRYPVPYKASGSTQPFWYSIKRASAYIIVLSSYSAYGKYTPQYKWLEQELPKVNRTETPWLIVLVHSPWYNSYNYHFLEGETMRVMFEPWFVKYKVDVVFAGHVHAYERSVSANTWLVNMTYPQPEYSAFREASFGHATFDIKNRTHAHYGWHRNQDGDAVQADSLWFFNRFWHPVDDSTTPVSH* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0083 434 Gene3D - 152 429 IPR029052 -
Lja3g0083 434 SUPERFAMILY Purple acid phosphatase, N-terminal domain 37 149 IPR008963 GO:0003993|GO:0046872
Lja3g0083 434 Pfam Purple acid Phosphatase, N-terminal domain 56 145 IPR015914 GO:0003993|GO:0046872
Lja3g0083 434 PANTHER PURPLE ACID PHOSPHATASE 367 431 - -
Lja3g0083 434 PANTHER ACID PHOSPHATASE RELATED 4 360 IPR039331 GO:0003993
Lja3g0083 434 SUPERFAMILY Metallo-dependent phosphatases 157 406 IPR029052 -
Lja3g0083 434 CDD MPP_PAPs 153 419 IPR041792 -
Lja3g0083 434 Gene3D - 55 151 - -
Lja3g0083 434 PANTHER PURPLE ACID PHOSPHATASE 4 360 - -
Lja3g0083 434 Pfam Calcineurin-like phosphoesterase 158 356 IPR004843 GO:0016787
Lja3g0083 434 Pfam Iron/zinc purple acid phosphatase-like protein C 365 408 IPR025733 -
Lja3g0083 434 PANTHER ACID PHOSPHATASE RELATED 367 431 IPR039331 GO:0003993
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0083 Lja-Chr3 922800 925946 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0083 114 409 Miscellaneous Gene Families AT1G13900 24.397 4.83e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0083 K22390 - gmx:100807555 759.214