Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0076 ATGAGAAACAATCATGTGCGTTTGAACTGTGGCATTACAATGCCTCTCATTGGATTTGGCACTTACTCCTTCCCAAATGATAAGAGGACAACAGAACATGCCATCCACAATGCACTTCAGATGGGTTATAGGCATTTTGATACAGCAAAAATATATGGTTCTGAGCCAGCAGTGGGGAAAGCCTTAAATGAGACAATCTACATGGGAGAAATAGAAAGGGAAGACATTTTCGTGACATCAAAACTGTGGGGGAGTGATCACCATGATCCTGTTTCTGCATTGAAACGAACTCTAGAGAATCTGGGCATGGAATATCTTGACATGTATCTAGTGCACTGGCCTGTCAAGTTGAAGCCATGGGTTAACTACCCTGTGCCTAATGAAGATGACTTTGAAAGTTTGGACCTTGAGACCACATGGGCAGGGATGGAGAAGTGCCTAGAAATGGGGTTGTGTAGGTGCATTGGGGTTAGCAATTTCTCTAGCAAGAAAATTGAGTGGCTATTAGATTTTGCTTCTACACCTCCAGCTGTTAACCAGGTTGAAATGCATCCAATGTGGAGGCAAGGAAAGCTCAGAGAGACATGTGGAGACCACAAGATCCATGTAAGTGCTTACTCACCACTTGGTGGACCAGGGAATGCTTGGGGATCTACAGCAGTGGTTGATCATCCAACCATCAAATCAATTGCCCACAAACACAAAGCAACTCCAGCACAGGTTGCATTGAATTGGGGACTATCAATGGGCTCAAGTGTAATTGTGAAAAGCTTCAGTCAAGAAAGAATGAAGGAGAATATAGGAGCATTTGATCTGAAATTGGATGATGAAGATATCTGGGAGATCGAGGAATTGGAGGAATTGAAGATCATGAGAGGGGAATTTCATGTTAATGAAACCACAAGTCCCTACAGAACAATTGAAGAGCTTTGGGATGATGAAATTTGA 948 0.4283 MRNNHVRLNCGITMPLIGFGTYSFPNDKRTTEHAIHNALQMGYRHFDTAKIYGSEPAVGKALNETIYMGEIEREDIFVTSKLWGSDHHDPVSALKRTLENLGMEYLDMYLVHWPVKLKPWVNYPVPNEDDFESLDLETTWAGMEKCLEMGLCRCIGVSNFSSKKIEWLLDFASTPPAVNQVEMHPMWRQGKLRETCGDHKIHVSAYSPLGGPGNAWGSTAVVDHPTIKSIAHKHKATPAQVALNWGLSMGSSVIVKSFSQERMKENIGAFDLKLDDEDIWEIEELEELKIMRGEFHVNETTSPYRTIEELWDDEI* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0076 315 ProSitePatterns Aldo/keto reductase family putative active site signature. 254 269 IPR018170 GO:0016491
Lja3g0076 315 SUPERFAMILY NAD(P)-linked oxidoreductase 6 285 IPR036812 -
Lja3g0076 315 PRINTS Aldo-keto reductase signature 143 160 IPR020471 GO:0016491
Lja3g0076 315 PRINTS Aldo-keto reductase signature 96 114 IPR020471 GO:0016491
Lja3g0076 315 PRINTS Aldo-keto reductase signature 221 245 IPR020471 GO:0016491
Lja3g0076 315 PRINTS Aldo-keto reductase signature 177 206 IPR020471 GO:0016491
Lja3g0076 315 PRINTS Aldo-keto reductase signature 38 62 IPR020471 GO:0016491
Lja3g0076 315 Pfam Aldo/keto reductase family 17 286 IPR023210 -
Lja3g0076 315 ProSitePatterns Aldo/keto reductase family signature 2. 143 160 IPR018170 GO:0016491
Lja3g0076 315 Gene3D - 3 315 IPR036812 -
Lja3g0076 315 PIRSF AKR 1 309 IPR020471 GO:0016491
Lja3g0076 315 PANTHER ALDO/KETO REDUCTASE 5 314 - -
Lja3g0076 315 ProSitePatterns Aldo/keto reductase family signature 1. 42 59 IPR018170 GO:0016491
Lja3g0076 315 PANTHER - 5 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0076 Lja-Chr3 866407 868547 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0076 - K00002 gmx:100786497 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0076 3 866407 868547 Lja3g0076 3 866407 868547 ECH