Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0073 ATGGCGTTTCCACCAGAGAATCAGAACCAGAATGAAAACCCTAACCCTAGCCCCATCCCTAGTCCTACATTGAAGAAGAAGAGAGGACCCAGGTGGTCCGATATCTGGCTCAAGCACACCAAATCCAAACCCCTCAGCCCCATGGTTGTGGCGATGCAGCTTCACTCTCTTCCTTCTCACAAAGACAAATCTGACAACATCAACAACCCCTTAATCTCCAACTTCTCCATCATTGACCGAACCCTTCTTCTTACTGACGAGCTTCTTCTCAGGATCCTCGCCAAGCTCCCTGATTCTCAGAGGAACTCGAATTCCCTCGTTTGCAAGCGCTGGCTCAATCTCCAGGGTCGCCTTGTTCGCTCAATCAGGATCCTGGACTGGAACTTCCTCTTATCTGGTAGATTGATTCACAGGTTCCCTAATCTCAACCATGTTGATTTGGTTCCTGGGTCTTTGATTTCACCTAAAAGCTCCTGCATTCTGATTGGGAATCGTGTTTTGTCGATGCATATCGATTCTGGGTCTTCCCCAAATTGGTGTTTTTGTGAGGAGAATATGCTTCCTGTTGAGGTCATTGATAATGGGCTTAGTGCACTGGCTAGTGGGTGTCCCAATTTGCGCAGGGTTCAGGTTGTCGGTGCCAGTGAGATGGGTTTGCTGAGTGTGGCTGAGGAGTGTCCTACATTGCAGGAACTGGAGCTGCAGATGTGCAGTGACAATGTGCTTCGCGGGATCGCGGCGTGTGTGAATCTGCAGATCTTGAAACTGGTTGGGAATGTTGATGGCTTCTATAGTTCTGTGGTTTCTGATATTGGGTTGACCATTTTGGCTCAGGGTTGTAAGAGGCTGGTGAAGCTGGAGCTTAGTGGGTGTGAAGGTAGCTTTGATGGGATTAAGGCTATTGGTAAGTGCTGTCAAATGTTGGAGGAGTTGACCTTCTGTGATCATAGGATGGATGATGGATGGCTTGCTGCACTTTCATACTGTGAGAATTTGAAGACCTTGAAGTTTCAGTCTTGTAAGAGAATTGATCAGAAGCCAGGGCTAGAGGAGTATTTGGGTTCTTGTCCTGCACTTGAACGGCTTCATTTGCAGAAATGCCAATTACGGGACAAGAAGAGCATTGCAGCTATGTTTTCTGTATGCAGGACTGCCAGGGAGATTATTCTTCAGGACTGCTGGGGATTGGATAATAGCATGTTCAGTCTTGCAGTTATTTGCAGGCGGGTAAAATTGATTTGCTTAGAAGGATGCTCATTGCTAACAACAGAAGGTTTGGAGTCTGTAATTCATTTGTGGAAGGAACTTCAGAGTCTTAGAGTAGTCTCATGTAAGCATATCAAGGACAGTGAAATCTCTCCTGCACTTGCAACCTCGTTTACCACCCTCAAAGAATTGAAATGGAGTCCAGACACCAAGTCACTACTTCCATCAAGACTTGTAGGGATAAGCATAGGAAAGAAAGGCGGGAAATTTTTCAAAAAGACATGA 1491 0.4621 MAFPPENQNQNENPNPSPIPSPTLKKKRGPRWSDIWLKHTKSKPLSPMVVAMQLHSLPSHKDKSDNINNPLISNFSIIDRTLLLTDELLLRILAKLPDSQRNSNSLVCKRWLNLQGRLVRSIRILDWNFLLSGRLIHRFPNLNHVDLVPGSLISPKSSCILIGNRVLSMHIDSGSSPNWCFCEENMLPVEVIDNGLSALASGCPNLRRVQVVGASEMGLLSVAEECPTLQELELQMCSDNVLRGIAACVNLQILKLVGNVDGFYSSVVSDIGLTILAQGCKRLVKLELSGCEGSFDGIKAIGKCCQMLEELTFCDHRMDDGWLAALSYCENLKTLKFQSCKRIDQKPGLEEYLGSCPALERLHLQKCQLRDKKSIAAMFSVCRTAREIILQDCWGLDNSMFSLAVICRRVKLICLEGCSLLTTEGLESVIHLWKELQSLRVVSCKHIKDSEISPALATSFTTLKELKWSPDTKSLLPSRLVGISIGKKGGKFFKKT* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0073 496 SUPERFAMILY RNI-like 267 467 - -
Lja3g0073 496 PANTHER F-BOX PLANT-LIKE PROTEIN 61 477 - -
Lja3g0073 496 SUPERFAMILY RNI-like 126 262 - -
Lja3g0073 496 SUPERFAMILY F-box domain 77 130 IPR036047 GO:0005515
Lja3g0073 496 Gene3D - 81 117 - -
Lja3g0073 496 Gene3D Ribonuclease Inhibitor 119 476 IPR032675 -
Lja3g0073 496 SMART LRR_CC_2 280 304 IPR006553 -
Lja3g0073 496 SMART LRR_CC_2 248 279 IPR006553 -
Lja3g0073 496 SMART LRR_CC_2 356 381 IPR006553 -
Lja3g0073 496 SMART LRR_CC_2 407 432 IPR006553 -
Lja3g0073 496 MobiDBLite consensus disorder prediction 1 28 - -
Lja3g0073 496 PANTHER UNCHARACTERIZED 61 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0073 Lja-Chr3 846539 849283 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0073 K10268 - gmx:100812193 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0073 3 846539 849283 Lja3g0073 3 846539 849283 ECH